RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TRIM29Q14134 588 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 ASPRV1Q53RT3 343 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 MYSM1Q5VVJ2 828 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 PRAMEF18Q5VWM3 479 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 TTBK2Q6IQ55 1244 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 BRAPQ7Z569 592 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 APOBEC3FQ8IUX4 373 aaKnown RBP8.04□□□□□ -1.12
PTCD2-201ENST00000308077 OXER1Q8TDS5 423 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 GPKOWQ92917 476 aaPredicted RBP eCLIP8.04□□□□□ -1.12
PTCD2-201ENST00000308077 USP28Q96RU2 1077 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 LZTS2Q9BRK4 669 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 PHF20Q9BVI0 1012 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 UBA5Q9GZZ9 404 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 GPCPD1Q9NPB8 672 aa8.04□□□□□ -1.12
PTCD2-201ENST00000308077 BTBD18B2RXH4 712 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 ADAMTS3O15072 1205 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 LMOD1P29536 600 aaPredicted RBP8.03□□□□□ -1.12
PTCD2-201ENST00000308077 DEKP35659 375 aaKnown RBP8.03□□□□□ -1.12
PTCD2-201ENST00000308077 ECE1P42892 770 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 NR5A1Q13285 461 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 WWC2Q6AWC2 1192 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 CHADLQ6NUI6 762 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 TYW1BQ6NUM6 668 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 KCTD1Q719H9 257 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 CCDC84Q86UT8 332 aaPredicted RBP8.03□□□□□ -1.12
PTCD2-201ENST00000308077 DIS3L2Q8IYB7 885 aaKnown RBP8.03□□□□□ -1.12
PTCD2-201ENST00000308077 ACER1Q8TDN7 264 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 LEO1Q8WVC0 666 aaPredicted RBP8.03□□□□□ -1.12
PTCD2-201ENST00000308077 L3MBTL3Q96JM7 780 aaPredicted RBP8.03□□□□□ -1.12
PTCD2-201ENST00000308077 RIOX1Q9H6W3 641 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 ADARB2Q9NS39 739 aaKnown RBP8.03□□□□□ -1.12
PTCD2-201ENST00000308077 F5H6K3 240 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 SMARCA1P28370 1054 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 CEBPZQ03701 1054 aaKnown RBP8.03□□□□□ -1.12
PTCD2-201ENST00000308077 KLRC3Q07444 240 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 CCDC96Q2M329 555 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 KLHL40Q2TBA0 621 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 KIAA1755Q5JYT7 1200 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 SLFN13Q68D06 897 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 GMCL1P1Q8NEA9 526 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 DCAF4Q8WV16 495 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 SPATA32Q96LK8 384 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 PIGSQ96S52 555 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 GLIS2Q9BZE0 524 aaPredicted RBP8.03□□□□□ -1.12
PTCD2-201ENST00000308077 RBM27Q9P2N5 1060 aaKnown RBP8.03□□□□□ -1.12
PTCD2-201ENST00000308077 FZD1Q9UP38 647 aa8.03□□□□□ -1.12
PTCD2-201ENST00000308077 DDX49Q9Y6V7 483 aaKnown RBP8.03□□□□□ -1.12
PTCD2-201ENST00000308077 PAPPA2Q9BXP8 1791 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 ELP1O95163 1332 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 STXBP3O00186 592 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 RAD21O60216 631 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 NDUFB10O96000 172 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 XBP1P17861 261 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 SKOR2Q2VWA4 1001 aaPredicted RBP8.02□□□□□ -1.13
PTCD2-201ENST00000308077 EARS2Q5JPH6 523 aaKnown RBP8.02□□□□□ -1.13
PTCD2-201ENST00000308077 GPATCH4Q5T3I0 446 aaKnown RBP8.02□□□□□ -1.13
PTCD2-201ENST00000308077 DLK2Q6UY11 383 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 HOMER1Q86YM7 354 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 NOSTRINQ8IVI9 506 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 TNFRSF25Q93038 417 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 ZNF396Q96N95 335 aaPredicted RBP8.02□□□□□ -1.13
PTCD2-201ENST00000308077 NUP88Q99567 741 aaPredicted RBP8.02□□□□□ -1.13
PTCD2-201ENST00000308077 SCAND2PQ9GZW5 306 aaPredicted RBP8.02□□□□□ -1.13
PTCD2-201ENST00000308077 FOXP1Q9H334 677 aaPredicted RBP8.02□□□□□ -1.13
PTCD2-201ENST00000308077 VAT1LQ9HCJ6 419 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 CLIC4Q9Y696 253 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 SCN4AP35499 1836 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 PHIPQ8WWQ0 1821 aa8.02□□□□□ -1.13
PTCD2-201ENST00000308077 FAM205CA6NFA0 338 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 INPP5BP32019 993 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 KRT2P35908 639 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 SLC16A2P36021 539 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 SLC1A4P43007 532 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 GNL2Q13823 731 aaKnown RBP8.01□□□□□ -1.13
PTCD2-201ENST00000308077 SAFBQ15424 915 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTCD2-201ENST00000308077 TPRNQ4KMQ1 711 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 NOM1Q5C9Z4 860 aaKnown RBP8.01□□□□□ -1.13
PTCD2-201ENST00000308077 ATL3Q6DD88 541 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 DPY19L2Q6NUT2 758 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 HEATR3Q7Z4Q2 680 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 ADGRF4Q8IZF3 695 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 RRP36Q96EU6 259 aaKnown RBP8.01□□□□□ -1.13
PTCD2-201ENST00000308077 GMCL1Q96IK5 515 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 JMJD4Q9H9V9 463 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 ARHGEF10LQ9HCE6 1279 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 SH3GLB2Q9NR46 395 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 BARHL2Q9NY43 387 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 RTEL1Q9NZ71 1219 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 CFAP45Q9UL16 551 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 SYNPO2Q9UMS6 1093 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 TMX2Q9Y320 296 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 PPP2R3BQ9Y5P8 575 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 OTOFQ9HC10 1997 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 CACNA1GO43497 2377 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 GLTPD2A6NH11 291 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 POTECB2RU33 542 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 USP17L10C9JJH3 530 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 TNFRSF10AO00220 468 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 PPP1R11O60927 126 aaPredicted RBP8.01□□□□□ -1.13
PTCD2-201ENST00000308077 ASNSP08243 561 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms