RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 CBX1P83916 185 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 DIXDC1Q155Q3 683 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 UTP14CQ5TAP6 766 aaKnown RBP8.18□□□□□ -1.1
RGPD3-201ENST00000304514 ATRIPQ8WXE1 791 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 ARID3AQ99856 593 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 DISC1Q9NRI5 854 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 SPATA31A6Q5VVP1 1343 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 RPN1P04843 607 aaKnown RBP8.18□□□□□ -1.1
RGPD3-201ENST00000304514 TCP11X2Q5H9J9 407 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 TGFBRAP1Q8WUH2 860 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 CTAGE1Q96RT6 745 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 TMEM47Q9BQJ4 181 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 SPDYE4A6NLX3 237 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 ONECUT3O60422 494 aaPredicted RBP8.18□□□□□ -1.1
RGPD3-201ENST00000304514 RHBDL3P58872 404 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 PIP4K2BP78356 416 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 WDR24Q96S15 920 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 SPZ1Q9BXG8 430 aa8.18□□□□□ -1.1
RGPD3-201ENST00000304514 LAD1O00515 517 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 ATP2B1P20020 1258 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 CALML3P27482 149 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 KRT31Q15323 416 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 IGKV6D-41A0A0C4DH26 115 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 KLRG2A4D1S0 409 aaPredicted RBP8.17□□□□□ -1.1
RGPD3-201ENST00000304514 AKR1B15C9JRZ8 316 aaPredicted RBP8.17□□□□□ -1.1
RGPD3-201ENST00000304514 PRPHP41219 470 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 BTDP43251 543 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 MAP3K9P80192 1104 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 MTF1Q14872 753 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 TRAPPC3LQ5T215 181 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 RAD9BQ6WBX8 426 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 ZMYND12Q9H0C1 365 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 TMEM60Q9H2L4 133 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 ANKIB1Q9P2G1 1089 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.17□□□□□ -1.1
RGPD3-201ENST00000304514 V9GYY5 206 aaPredicted RBP8.17□□□□□ -1.1
RGPD3-201ENST00000304514 COBLO75128 1261 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 RSRC2Q7L4I2 434 aaKnown RBP8.17□□□□□ -1.1
RGPD3-201ENST00000304514 SLC44A5Q8NCS7 719 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 RASGRP4Q8TDF6 673 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 TADA3O75528 432 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 TSPY3P0CV98 308 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 TSPY8P0CW00 308 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 SMARCA1P28370 1054 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 USP5P45974 858 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 IQUBQ8NA54 791 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 NELFBQ8WX92 580 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 LZTS2Q9BRK4 669 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 SAP30BPQ9UHR5 308 aaKnown RBP8.17□□□□□ -1.1
RGPD3-201ENST00000304514 USP21Q9UK80 565 aa8.17□□□□□ -1.1
RGPD3-201ENST00000304514 GOLGA6L9A6NEM1 432 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 EDIL3O43854 480 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 ADRA2BP18089 450 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 PMS1P54277 932 aaKnown RBP8.16□□□□□ -1.1
RGPD3-201ENST00000304514 KCNB1Q14721 858 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 CERS3Q8IU89 383 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 CNBD1Q8NA66 436 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 POLLQ9UGP5 575 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 GYS1P13807 737 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 GTF2E1P29083 439 aaPredicted RBP8.16□□□□□ -1.1
RGPD3-201ENST00000304514 CDK8P49336 464 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 ERVK-24P63145 666 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 PAK1Q13153 545 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 COBLL1Q53SF7 1204 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 ADSSL1Q8N142 457 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 ZNF507Q8TCN5 953 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 KBTBD4Q9NVX7 518 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 FHOD1Q9Y613 1164 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 RNF225M0QZC1 329 aaPredicted RBP8.16□□□□□ -1.1
RGPD3-201ENST00000304514 RFC4P35249 363 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 PRCPP42785 496 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 STX17P56962 302 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 FAM182BQ5T319 152 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 IRF2BP1Q8IU81 584 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 FAM163AQ96GL9 167 aaPredicted RBP8.16□□□□□ -1.1
RGPD3-201ENST00000304514 RMND1Q9NWS8 449 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 MYL1P05976 194 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 CDK11BP21127 795 aaKnown RBP8.16□□□□□ -1.1
RGPD3-201ENST00000304514 CASQ1P31415 396 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 KARSQ15046 597 aaKnown RBP8.16□□□□□ -1.1
RGPD3-201ENST00000304514 IGSF22Q8N9C0 903 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 RBM17Q96I25 401 aaKnown RBP8.16□□□□□ -1.1
RGPD3-201ENST00000304514 CD209Q9NNX6 404 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 PP2D1A8MPX8 630 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 KCNJ18B7U540 433 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 TOM1O60784 492 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 SEMA3FQ13275 785 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 KCNJ12Q14500 433 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 RRAGBQ5VZM2 374 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 MAPKAPK5Q8IW41 473 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 CCDC51Q96ER9 411 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 SRRTQ9BXP5 876 aaKnown RBP8.16□□□□□ -1.1
RGPD3-201ENST00000304514 ABHD10Q9NUJ1 306 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 ADGRG1Q9Y653 693 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 SCN9AQ15858 1988 aa8.16□□□□□ -1.1
RGPD3-201ENST00000304514 EFCAB8A8MWE9 144 aa8.15□□□□□ -1.1
RGPD3-201ENST00000304514 RHOBTB3O94955 611 aa8.15□□□□□ -1.1
RGPD3-201ENST00000304514 ATP2B4P23634 1241 aa8.15□□□□□ -1.1
RGPD3-201ENST00000304514 CASP14P31944 242 aa8.15□□□□□ -1.1
RGPD3-201ENST00000304514 ERCC6LQ2NKX8 1250 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms