RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 TFR2Q9UP52 801 aa8.94□□□□□ -0.98
NKRF-201ENST00000304449 XDHP47989 1333 aa8.94□□□□□ -0.98
NKRF-201ENST00000304449 SLC5A1P13866 664 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 TAF1P21675 1872 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 MMP14P50281 582 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 PDXDC2PQ6P474 469 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 KIRREL3Q8IZU9 778 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 HNRNPLLQ8WVV9 542 aaKnown RBP8.93□□□□□ -0.98
NKRF-201ENST00000304449 NAA15Q9BXJ9 866 aaKnown RBP8.93□□□□□ -0.98
NKRF-201ENST00000304449 SLC24A3Q9HC58 644 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 CABP5Q9NP86 173 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 HOOK1Q9UJC3 728 aaKnown RBP8.93□□□□□ -0.98
NKRF-201ENST00000304449 MAST2Q6P0Q8 1798 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 RDXP35241 583 aaKnown RBP8.93□□□□□ -0.98
NKRF-201ENST00000304449 RNF187Q5TA31 235 aaPredicted RBP8.93□□□□□ -0.98
NKRF-201ENST00000304449 CEP57Q86XR8 500 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 C4orf32Q8N8J7 132 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 MSANTD4Q8NCY6 345 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 GSDMAQ96QA5 445 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 CD248Q9HCU0 757 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 SLC4A4Q9Y6R1 1079 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 TNKSO95271 1327 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 AKR1B15C9JRZ8 316 aaPredicted RBP8.93□□□□□ -0.98
NKRF-201ENST00000304449 MFAP3LO75121 409 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 NTSR2O95665 410 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 CASP1P29466 404 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 CCT6AP40227 531 aaKnown RBP8.93□□□□□ -0.98
NKRF-201ENST00000304449 ARHGAP25P42331 645 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 MATR3P43243 847 aaKnown RBP eCLIP8.93□□□□□ -0.98
NKRF-201ENST00000304449 ATP2C1P98194 919 aaPredicted RBP8.93□□□□□ -0.98
NKRF-201ENST00000304449 DZIP3Q86Y13 1208 aaKnown RBP8.93□□□□□ -0.98
NKRF-201ENST00000304449 CCDC82Q8N4S0 544 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 CCDC148Q8NFR7 591 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 CAGE1Q8TC20 777 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 SYMPKQ92797 1274 aaKnown RBP8.93□□□□□ -0.98
NKRF-201ENST00000304449 SLF1Q9BQI6 1058 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 GBP3Q9H0R5 595 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 TRIM10Q9UDY6 481 aa8.93□□□□□ -0.98
NKRF-201ENST00000304449 LIMA1Q9UHB6 759 aaKnown RBP8.93□□□□□ -0.98
NKRF-201ENST00000304449 MYH8P13535 1937 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 CCDC196A0A1B0GTZ2 297 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 GOLGA6CA6NDK9 693 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 CAMTA2O94983 1202 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 GOLGA6DP0CG33 693 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 CDC25AP30304 524 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 ATP1A2P50993 1020 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 FXR1P51114 621 aaKnown RBP eCLIP8.92□□□□□ -0.98
NKRF-201ENST00000304449 ERVK-24P63145 666 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 STIM1Q13586 685 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 TRIM22Q8IYM9 498 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 CNPY4Q8N129 248 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 FAM76AQ8TAV0 307 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 GOLGA6AQ9NYA3 693 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 SLAIN2Q9P270 581 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 CEP131Q9UPN4 1083 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.92□□□□□ -0.98
NKRF-201ENST00000304449 ZNF330Q9Y3S2 320 aaPredicted RBP8.92□□□□□ -0.98
NKRF-201ENST00000304449 CNTNAP5Q8WYK1 1306 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 SHTN1A0MZ66 631 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 POTEB2H3BUK9 544 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 GNGT1P63211 74 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 ACTN3Q08043 901 aaPredicted RBP8.92□□□□□ -0.98
NKRF-201ENST00000304449 WTIPA6NIX2 430 aaPredicted RBP8.92□□□□□ -0.98
NKRF-201ENST00000304449 M0R2N6 131 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 ATP2C2O75185 946 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 PLEKHA8P1O95397 391 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 SYF2O95926 243 aaKnown RBP8.92□□□□□ -0.98
NKRF-201ENST00000304449 CASP14P31944 242 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 AMPD2Q01433 879 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 EVX2Q03828 476 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 SAFBQ15424 915 aaKnown RBP eCLIP8.92□□□□□ -0.98
NKRF-201ENST00000304449 KCTD16Q68DU8 428 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 KCNV1Q6PIU1 500 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 GPIHBP1Q8IV16 184 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 SMYD4Q8IYR2 804 aaPredicted RBP8.92□□□□□ -0.98
NKRF-201ENST00000304449 FERMT2Q96AC1 680 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 NAPGQ99747 312 aaPredicted RBP8.92□□□□□ -0.98
NKRF-201ENST00000304449 VPS54Q9P1Q0 977 aa8.92□□□□□ -0.98
NKRF-201ENST00000304449 NRAPQ86VF7 1730 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 KIAA0754O94854 1291 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 AFMP43652 599 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 MAP9Q49MG5 647 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 RPAINQ86UA6 219 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 IRF2BP1Q8IU81 584 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 SUGP1Q8IWZ8 645 aaKnown RBP8.91□□□□□ -0.98
NKRF-201ENST00000304449 SDR42E1Q8WUS8 393 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 ZSCAN10Q96SZ4 725 aaPredicted RBP8.91□□□□□ -0.98
NKRF-201ENST00000304449 MED4Q9NPJ6 270 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 SYNRGQ9UMZ2 1314 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 NDUFAB1O14561 156 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 VEGFAP15692 232 aaPredicted RBP8.91□□□□□ -0.98
NKRF-201ENST00000304449 USP8P40818 1118 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 SF3A3Q12874 501 aaKnown RBP eCLIP8.91□□□□□ -0.98
NKRF-201ENST00000304449 OTUD6BQ8N6M0 293 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 MIGA1Q8NAN2 632 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 BRIP1Q9BX63 1249 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 RNF41Q9H4P4 317 aaPredicted RBP8.91□□□□□ -0.98
NKRF-201ENST00000304449 DONSONQ9NYP3 566 aa8.91□□□□□ -0.98
NKRF-201ENST00000304449 REXO2Q9Y3B8 237 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms