RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 MSCO60682 206 aa12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 ZBED4O75132 1171 aa12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 BMP3P12645 472 aa12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 RRP12Q5JTH9 1297 aaKnown RBP12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 OLFML2BQ68BL8 750 aa12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 SNRNP48Q6IEG0 339 aaKnown RBP12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 GMCL1P1Q8NEA9 526 aa12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 TEX13BQ9BXU2 312 aa12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 OSBPL3Q9H4L5 887 aa12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 C11orf49Q9H6J7 331 aa12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 ANAPC4Q9UJX5 808 aa12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 ZNF214Q9UL59 606 aaPredicted RBP12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 ADAMTS5Q9UNA0 930 aa12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
HMGN1P35-201ENST00000303758 HIP1O00291 1037 aa12.86□□□□□ -0.35
HMGN1P35-201ENST00000303758 HSPD1P10809 573 aaKnown RBP12.86□□□□□ -0.35
HMGN1P35-201ENST00000303758 SDSP20132 328 aa12.86□□□□□ -0.35
HMGN1P35-201ENST00000303758 SLC1A4P43007 532 aa12.86□□□□□ -0.35
HMGN1P35-201ENST00000303758 ALX1Q15699 326 aa12.86□□□□□ -0.35
HMGN1P35-201ENST00000303758 ZNF589Q86UQ0 364 aaPredicted RBP12.86□□□□□ -0.35
HMGN1P35-201ENST00000303758 CPXCR1Q8N123 301 aa12.86□□□□□ -0.35
HMGN1P35-201ENST00000303758 CHMP4CQ96CF2 233 aa12.86□□□□□ -0.35
HMGN1P35-201ENST00000303758 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
HMGN1P35-201ENST00000303758 MTMR7Q9Y216 660 aa12.86□□□□□ -0.35
HMGN1P35-201ENST00000303758 ZMYM6O95789 1325 aa12.86□□□□□ -0.35
HMGN1P35-201ENST00000303758 TMEM232C9JQI7 657 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 COBLO75128 1261 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 FGAP02671 866 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 PGK2P07205 417 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 STAT2P52630 851 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 HAND2P61296 217 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 HABP4Q5JVS0 413 aaKnown RBP12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 CWC27Q6UX04 472 aaKnown RBP12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 C7orf61Q8IZ16 206 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 REPS2Q8NFH8 660 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 MAML3Q96JK9 1138 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 INCENPQ9NQS7 918 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 COLQQ9Y215 455 aaPredicted RBP12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 DNAH12Q6ZR08 3092 aa12.85□□□□□ -0.35
HMGN1P35-201ENST00000303758 ORC4O43929 436 aa12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 NMT2O60551 498 aa12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 SLC34A2O95436 690 aa12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 CYBAP13498 195 aa12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 CCDC96Q2M329 555 aa12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 LHX8Q68G74 356 aa12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 FAM160B2Q86V87 743 aa12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 CHURC1Q8WUH1 139 aa12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 DDX11Q96FC9 970 aa12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 GMCL1Q96IK5 515 aa12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 RAVER2Q9HCJ3 691 aaKnown RBP12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 CEP290O15078 2479 aa12.84□□□□□ -0.35
HMGN1P35-201ENST00000303758 FDX1P10109 184 aa12.83□□□□□ -0.36
HMGN1P35-201ENST00000303758 MCCP23508 829 aa12.83□□□□□ -0.36
HMGN1P35-201ENST00000303758 MFSD6Q6ZSS7 791 aa12.83□□□□□ -0.36
HMGN1P35-201ENST00000303758 ANKRD35Q8N283 1001 aa12.83□□□□□ -0.36
HMGN1P35-201ENST00000303758 TRPV1Q8NER1 839 aa12.83□□□□□ -0.36
HMGN1P35-201ENST00000303758 RNF41Q9H4P4 317 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P35-201ENST00000303758 SLC38A10Q9HBR0 1119 aa12.83□□□□□ -0.36
HMGN1P35-201ENST00000303758 FBXO40Q9UH90 709 aa12.83□□□□□ -0.36
HMGN1P35-201ENST00000303758 KBTBD13C9JR72 458 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 ZNF213O14771 459 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 SEPT4O43236 478 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 PCP11498 1178 aaKnown RBP12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 OAZ1P54368 228 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 AKNAD1Q5T1N1 836 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 ANO1Q5XXA6 986 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 STAG1Q8WVM7 1258 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 TINF2Q9BSI4 451 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 IL17RBQ9NRM6 502 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 HOMER2Q9NSB8 354 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 CNPY2Q9Y2B0 182 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 DIS3Q9Y2L1 958 aaKnown RBP12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 RIPK3Q9Y572 518 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 PFASO15067 1338 aa12.82□□□□□ -0.36
HMGN1P35-201ENST00000303758 DNM1LO00429 736 aa12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 ATP2A1O14983 1001 aa12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 FGRP09769 529 aa12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 TOP1P11387 765 aaKnown RBP12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 ZNF792Q3KQV3 632 aa12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 PRAMEF19Q5SWL8 479 aa12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 RCSD1Q6JBY9 416 aa12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 ARRDC4Q8NCT1 418 aa12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 CHST13Q8NET6 341 aa12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 DCAF4Q8WV16 495 aa12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 ESR2Q92731 530 aa12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 SENP6Q9GZR1 1112 aaPredicted RBP12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 ZMYND8Q9ULU4 1186 aaPredicted RBP12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 TACC3Q9Y6A5 838 aa12.81□□□□□ -0.36
HMGN1P35-201ENST00000303758 RARBP10826 455 aa12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 COL6A1P12109 1028 aa12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 IMMTQ16891 758 aaKnown RBP12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 GJC2Q5T442 439 aaPredicted RBP12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 TTC22Q5TAA0 569 aa12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 CCDC174Q6PII3 467 aa12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 RASGRP2Q7LDG7 609 aa12.8□□□□□ -0.36
HMGN1P35-201ENST00000303758 TBC1D10CQ8IV04 446 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms