RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CETPP11597 493 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 TM4SF4P48230 202 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 SLC4A3P48751 1232 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 CCL15Q16663 113 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 SYNE3Q6ZMZ3 975 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 GADL1Q6ZQY3 521 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 FASTKD5Q7L8L6 764 aaKnown RBP11.04□□□□□ -0.64
RFX3-201ENST00000302303 ADGRF4Q8IZF3 695 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 CCDC82Q8N4S0 544 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 REPS2Q8NFH8 660 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 CAPNS2Q96L46 248 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 SPZ1Q9BXG8 430 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 RBM28Q9NW13 759 aaKnown RBP11.04□□□□□ -0.64
RFX3-201ENST00000302303 TMOD4Q9NZQ9 345 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 PRR12Q9ULL5 1215 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 NAP1L2Q9ULW6 460 aaPredicted RBP11.04□□□□□ -0.64
RFX3-201ENST00000302303 ZNF536O15090 1300 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 USP17L15C9J2P7 530 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 USP17L13C9JLJ4 530 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 USP17L11C9JVI0 530 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 USP17L18D6R9N7 530 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 USP17L22D6RA61 530 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 USP17L17D6RBQ6 530 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 USP17L19D6RCP7 530 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 USP17L20D6RJB6 530 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 PEX10O60683 326 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 HSPA6P17066 643 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 VEGFBP49765 207 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 SNAP25P60880 206 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 KIF23Q02241 960 aaPredicted RBP11.04□□□□□ -0.64
RFX3-201ENST00000302303 USP17L24Q0WX57 530 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 CCDC96Q2M329 555 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 ANKRD23Q86SG2 305 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 CTCFLQ8NI51 663 aaPredicted RBP11.04□□□□□ -0.64
RFX3-201ENST00000302303 PHKBQ93100 1093 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 P2RX7Q99572 595 aaKnown RBP11.04□□□□□ -0.64
RFX3-201ENST00000302303 ASCC2Q9H1I8 757 aaPredicted RBP11.04□□□□□ -0.64
RFX3-201ENST00000302303 FEM1BQ9UK73 627 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 PPP1R9AQ9ULJ8 1098 aa11.04□□□□□ -0.64
RFX3-201ENST00000302303 hCG_1642624A0A1W2PR95 340 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 MANSC4A6NHS7 340 aaPredicted RBP11.03□□□□□ -0.64
RFX3-201ENST00000302303 SPDYE16A6NNV3 312 aaPredicted RBP11.03□□□□□ -0.64
RFX3-201ENST00000302303 CNMDO75829 334 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 DSG3P32926 999 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 KIF5BP33176 963 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 GNAQP50148 359 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 STAT2P52630 851 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 COG2Q14746 738 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 SYDE2Q5VT97 1194 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 LBX2Q6XYB7 198 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 IFNL1Q8IU54 200 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 DNAJC5GQ8N7S2 189 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 PRPF38AQ8NAV1 312 aaKnown RBP11.03□□□□□ -0.64
RFX3-201ENST00000302303 ATG4CQ96DT6 458 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 AIFM3Q96NN9 605 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 LLPHQ9BRT6 129 aaKnown RBP11.03□□□□□ -0.64
RFX3-201ENST00000302303 RANBP17Q9H2T7 1088 aaKnown RBP11.03□□□□□ -0.64
RFX3-201ENST00000302303 SLC45A1Q9Y2W3 748 aa11.03□□□□□ -0.64
RFX3-201ENST00000302303 V9GY48 417 aaPredicted RBP11.03□□□□□ -0.64
RFX3-201ENST00000302303 BAZ2BQ9UIF8 2168 aaKnown RBP11.02□□□□□ -0.64
RFX3-201ENST00000302303 ADGRA2Q96PE1 1338 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 WDR33Q9C0J8 1336 aaKnown RBP11.02□□□□□ -0.65
RFX3-201ENST00000302303 CCDC196A0A1B0GTZ2 297 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 PDHXO00330 501 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 VWA5AO00534 786 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 PRPF3O43395 683 aaKnown RBP11.02□□□□□ -0.65
RFX3-201ENST00000302303 FLOT1O75955 427 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 FMNL1O95466 1100 aaPredicted RBP11.02□□□□□ -0.65
RFX3-201ENST00000302303 CYP2C8P10632 490 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 NOGQ13253 232 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 TYW1BQ6NUM6 668 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 FAM160B2Q86V87 743 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 HSCBQ8IWL3 235 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 CHURC1Q8WUH1 139 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 KIFC2Q96AC6 838 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 INTS4Q96HW7 963 aaKnown RBP11.02□□□□□ -0.65
RFX3-201ENST00000302303 PIGSQ96S52 555 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 SLF1Q9BQI6 1058 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 LZTS2Q9BRK4 669 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 TANGO6Q9C0B7 1094 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 R3HDMLQ9H3Y0 253 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 SLC38A10Q9HBR0 1119 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 VAT1LQ9HCJ6 419 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 TXNRD2Q9NNW7 524 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 BTBD7Q9P203 1132 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 RBPJLQ9UBG7 517 aa11.02□□□□□ -0.65
RFX3-201ENST00000302303 MYPNQ86TC9 1320 aa11.01□□□□□ -0.65
RFX3-201ENST00000302303 PTPDC1A2A3K4 754 aa11.01□□□□□ -0.65
RFX3-201ENST00000302303 ADAMTS3O15072 1205 aa11.01□□□□□ -0.65
RFX3-201ENST00000302303 TAL1P17542 331 aaPredicted RBP11.01□□□□□ -0.65
RFX3-201ENST00000302303 INHBEP58166 350 aa11.01□□□□□ -0.65
RFX3-201ENST00000302303 HERVK_113P62684 666 aa11.01□□□□□ -0.65
RFX3-201ENST00000302303 TMEM132BQ14DG7 1078 aa11.01□□□□□ -0.65
RFX3-201ENST00000302303 RNF26Q9BY78 433 aaPredicted RBP11.01□□□□□ -0.65
RFX3-201ENST00000302303 GJB4Q9NTQ9 266 aa11.01□□□□□ -0.65
RFX3-201ENST00000302303 ZNF214Q9UL59 606 aaPredicted RBP11.01□□□□□ -0.65
RFX3-201ENST00000302303 SMCHD1A6NHR9 2005 aa11.01□□□□□ -0.65
RFX3-201ENST00000302303 A0A0G2JMZ2 1700 aa11.01□□□□□ -0.65
RFX3-201ENST00000302303 STK36Q9NRP7 1315 aa11.01□□□□□ -0.65
RFX3-201ENST00000302303 OPLAHO14841 1288 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms