RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TMEM266Q2M3C6 531 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 MSL1Q68DK7 614 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 TYW1BQ6NUM6 668 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 CYP26C1Q6V0L0 522 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 HDXQ7Z353 690 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 NBPF11Q86T75 865 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 GPR161Q8N6U8 529 aaKnown RBP15.75■□□□□ 0.11
SDC2-201ENST00000302190 ISCA1Q9BUE6 129 aa15.75■□□□□ 0.11
SDC2-201ENST00000302190 ATP2C2O75185 946 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 TUBB4AP04350 444 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 CALM1P0DP23 149 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 CALM2P0DP24 149 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 CALM3P0DP25 149 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 PTPREP23469 700 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 TECP42680 631 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 CASP7P55210 303 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
SDC2-201ENST00000302190 TFRCP02786 760 aaKnown RBP15.74■□□□□ 0.11
SDC2-201ENST00000302190 USP17L8P0C7I0 530 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 TAF4BQ92750 862 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 BIN2Q9UBW5 565 aaPredicted RBP15.74■□□□□ 0.11
SDC2-201ENST00000302190 TCEAL9Q9UHQ7 104 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 TFR2Q9UP52 801 aa15.74■□□□□ 0.11
SDC2-201ENST00000302190 SRGAP2O75044 1071 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 IL6STP40189 918 aaPredicted RBP15.73■□□□□ 0.11
SDC2-201ENST00000302190 ZSCAN26Q16670 478 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 CT47A1Q5JQC4 288 aaPredicted RBP15.73■□□□□ 0.11
SDC2-201ENST00000302190 TBC1D9BQ66K14 1250 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 TTC19Q6DKK2 380 aaPredicted RBP15.73■□□□□ 0.11
SDC2-201ENST00000302190 NELFCDQ8IXH7 590 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 PNMA1Q8ND90 353 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 PAGE5Q96GU1 130 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 SLC39A2Q9NP94 309 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 LOC102724159A0A0B4J2E5 919 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 CXCR5P32302 372 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 RFC4P35249 363 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 CUL4BQ13620 913 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 PWP2Q15269 919 aaKnown RBP15.73■□□□□ 0.11
SDC2-201ENST00000302190 DIXDC1Q155Q3 683 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 TMTC1Q8IUR5 882 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 IGDCC4Q8TDY8 1250 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 ARHGEF1Q92888 912 aaKnown RBP15.73■□□□□ 0.11
SDC2-201ENST00000302190 FOXP1Q9H334 677 aaPredicted RBP15.73■□□□□ 0.11
SDC2-201ENST00000302190 B4DLN1 442 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 SCG2P13521 617 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 LIFRP42702 1097 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 MAATS1Q7Z4T9 603 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 TAX1BP1Q86VP1 789 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 JAKMIP2Q96AA8 810 aa15.73■□□□□ 0.11
SDC2-201ENST00000302190 EPB41L4AQ9HCS5 686 aaPredicted RBP15.73■□□□□ 0.11
SDC2-201ENST00000302190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.72■□□□□ 0.11
SDC2-201ENST00000302190 PRDX5P30044 214 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 AMPD3Q01432 767 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 IQCEQ6IPM2 695 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 RBM43Q6ZSC3 357 aaKnown RBP15.72■□□□□ 0.11
SDC2-201ENST00000302190 NYAP1Q6ZVC0 841 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 C3orf67Q6ZVT6 689 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 C2CD5Q86YS7 1000 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 FOXP4Q8IVH2 680 aaPredicted RBP15.72■□□□□ 0.11
SDC2-201ENST00000302190 FERMT2Q96AC1 680 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 TRAF5O00463 557 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 ENOX1Q8TC92 643 aaKnown RBP15.72■□□□□ 0.11
SDC2-201ENST00000302190 TSG101Q99816 390 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 RBM28Q9NW13 759 aaKnown RBP15.72■□□□□ 0.11
SDC2-201ENST00000302190 TTF2Q9UNY4 1162 aaKnown RBP15.72■□□□□ 0.11
SDC2-201ENST00000302190 GOLGA6L10A6NI86 522 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 POTEB2H3BUK9 544 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 COPB1P53618 953 aaKnown RBP15.72■□□□□ 0.11
SDC2-201ENST00000302190 DEFB132Q7Z7B7 95 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 PROM2Q8N271 834 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 CCDC113Q9H0I3 377 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 EFCC1Q9HA90 598 aa15.72■□□□□ 0.11
SDC2-201ENST00000302190 RTCBQ9Y3I0 505 aaKnown RBP15.72■□□□□ 0.11
SDC2-201ENST00000302190 SRPRBQ9Y5M8 271 aaKnown RBP15.72■□□□□ 0.11
SDC2-201ENST00000302190 EPN1Q9Y6I3 576 aaPredicted RBP15.72■□□□□ 0.11
SDC2-201ENST00000302190 NWD2Q9ULI1 1742 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 USP17L3A6NCW0 530 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 USP17L4A6NCW7 530 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 RPS8P62241 208 aaKnown RBP15.71■□□□□ 0.11
SDC2-201ENST00000302190 SYCP1Q15431 976 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 RNF187Q5TA31 235 aaPredicted RBP15.71■□□□□ 0.11
SDC2-201ENST00000302190 USP17L1Q7RTZ2 530 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 ENAHQ8N8S7 591 aaPredicted RBP15.71■□□□□ 0.11
SDC2-201ENST00000302190 SLC44A5Q8NCS7 719 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 SPAG5Q96R06 1193 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 SUGCTQ9HAC7 445 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 CAMTA2O94983 1202 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 RPN1P04843 607 aaKnown RBP15.71■□□□□ 0.11
SDC2-201ENST00000302190 USP8P40818 1118 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 KRT83P78385 493 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 EN1Q05925 392 aaPredicted RBP15.71■□□□□ 0.11
SDC2-201ENST00000302190 ERFEQ4G0M1 354 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 BLIDQ8IZY5 108 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 OR8K1Q8NGG5 319 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 ALS2CR12Q96Q35 445 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 ZNF287Q9HBT7 754 aa15.71■□□□□ 0.11
SDC2-201ENST00000302190 LUC7LQ9NQ29 371 aaKnown RBP15.71■□□□□ 0.11
SDC2-201ENST00000302190 CLGNO14967 610 aa15.71■□□□□ 0.1
SDC2-201ENST00000302190 TACC1O75410 805 aa15.71■□□□□ 0.1
SDC2-201ENST00000302190 MRPL44Q9H9J2 332 aaKnown RBP15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms