RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 PPP4R1Q8TF05 950 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 ARHGAP45Q92619 1136 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 TPCN1Q9ULQ1 816 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 MGEA5O60502 916 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 FTCDO95954 541 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 VWA3BQ502W6 1294 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 CCDC93Q567U6 631 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 LINS1Q8NG48 757 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 TESPA1A2RU30 521 aaPredicted RBP13.57□□□□□ -0.24
ABCA3-201ENST00000301732 SYNDIG1LA6NDD5 238 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 GNAT2P19087 354 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 IGBP1P78318 339 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 RAPH1Q70E73 1250 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 PPM1KQ8N3J5 372 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 MLKLQ8NB16 471 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 IFT140Q96RY7 1462 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 FLOT1O75955 427 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 YARSP54577 528 aaKnown RBP13.57□□□□□ -0.24
ABCA3-201ENST00000301732 YWHAGP61981 247 aaKnown RBP eCLIP13.57□□□□□ -0.24
ABCA3-201ENST00000301732 ARID5BQ14865 1188 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 TMED2Q15363 201 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 SPOUT1Q5T280 376 aaKnown RBP13.57□□□□□ -0.24
ABCA3-201ENST00000301732 MLXIPLQ9NP71 852 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 SLC8A3P57103 927 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 TRIM14Q14142 442 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 EYA1Q99502 592 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 EPB41L5Q9HCM4 733 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
ABCA3-201ENST00000301732 KDRP35968 1356 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 LRRN2O75325 713 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 PPFIA2O75334 1257 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 MRPL12P52815 198 aaKnown RBP13.57□□□□□ -0.24
ABCA3-201ENST00000301732 TCP11X2Q5H9J9 407 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 MYSM1Q5VVJ2 828 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 CDC26Q8NHZ8 85 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 HAUS1Q96CS2 278 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 EPC1Q9H2F5 836 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 KDM2BQ8NHM5 1336 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 GJA10Q969M2 543 aa13.57□□□□□ -0.24
ABCA3-201ENST00000301732 EHBP1L1Q8N3D4 1523 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 RAB3IPQ96QF0 476 aaPredicted RBP13.56□□□□□ -0.24
ABCA3-201ENST00000301732 PLCB1Q9NQ66 1216 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 ZNF148Q9UQR1 794 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 NUB1Q9Y5A7 615 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 NESP48681 1621 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 EEF1B2P24534 225 aaKnown RBP13.56□□□□□ -0.24
ABCA3-201ENST00000301732 SLC1A4P43007 532 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 TFAP4Q01664 338 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 NBPF14Q5TI25 921 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 FAM47EQ6ZV65 393 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 TEX13AQ9BXU3 409 aaPredicted RBP13.56□□□□□ -0.24
ABCA3-201ENST00000301732 TIAM1Q13009 1591 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 SOWAHDA6NJG2 315 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 ALDH1L1O75891 902 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 MOCS3O95396 460 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 TRAPPC10P48553 1259 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 ADCY7P51828 1080 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
ABCA3-201ENST00000301732 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.56□□□□□ -0.24
ABCA3-201ENST00000301732 AP1M1Q9BXS5 423 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 A0A0D9SFI3 127 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 ARPP21Q9UBL0 812 aaPredicted RBP13.56□□□□□ -0.24
ABCA3-201ENST00000301732 PDHA1P08559 390 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 ECE1P42892 770 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 AKAP4Q5JQC9 854 aa13.56□□□□□ -0.24
ABCA3-201ENST00000301732 SUPT6HQ7KZ85 1726 aaKnown RBP13.55□□□□□ -0.24
ABCA3-201ENST00000301732 SGK1O00141 431 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 CD2BP2O95400 341 aaKnown RBP13.55□□□□□ -0.24
ABCA3-201ENST00000301732 IMPACTQ9P2X3 320 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 FAM135AQ9P2D6 1515 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 SMCO2A6NFE2 343 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 GSPT1P15170 499 aaKnown RBP13.55□□□□□ -0.24
ABCA3-201ENST00000301732 PLTPP55058 493 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 LRRC8CQ8TDW0 803 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 KIAA1468Q9P260 1216 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 SGSM2O43147 1006 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 C11orf57Q6ZUT1 292 aaPredicted RBP13.55□□□□□ -0.24
ABCA3-201ENST00000301732 NAP1L4Q99733 375 aaKnown RBP13.55□□□□□ -0.24
ABCA3-201ENST00000301732 CC2D2AQ9P2K1 1620 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 LRRD1A4D1F6 860 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 MYCP01106 439 aaPredicted RBP13.55□□□□□ -0.24
ABCA3-201ENST00000301732 RBL2Q08999 1139 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 NONOQ15233 471 aaKnown RBP eCLIP13.55□□□□□ -0.241e-7■■■■□ 26.6
ABCA3-201ENST00000301732 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 SUGCTQ9HAC7 445 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 KRT82Q9NSB4 513 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 TSR3Q9UJK0 312 aaKnown RBP13.55□□□□□ -0.24
ABCA3-201ENST00000301732 PPIP5K1Q6PFW1 1433 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 BCRP11274 1271 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 Q3C1V9 767 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 CARD14Q9BXL6 1004 aa13.55□□□□□ -0.24
ABCA3-201ENST00000301732 DYDC2Q96IM9 177 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 RAB20Q9NX57 234 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 USP19O94966 1318 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 AFAP1L2Q8N4X5 818 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 FAM167BQ9BTA0 163 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 NUP58Q9BVL2 599 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 RAB17Q9H0T7 212 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 BTBD18B2RXH4 712 aa13.54□□□□□ -0.24
ABCA3-201ENST00000301732 HIBADHP31937 336 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms