RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 MARCKSP29966 332 aaPredicted RBP18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 GNA11P29992 359 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 KLRC3Q07444 240 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 KCTD1Q719H9 257 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 MIGA2Q7L4E1 593 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 ADGRF4Q8IZF3 695 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 GMCL1Q96IK5 515 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 ZMYND12Q9H0C1 365 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 CLSTN2Q9H4D0 955 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 C6orf50Q9HD87 102 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 HACL1Q9UJ83 578 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 ZBTB21Q9ULJ3 1066 aa18.01■□□□□ 0.47
HERPUD1-201ENST00000300302 PNMA6FA0A0J9YX94 578 aa18■□□□□ 0.47
HERPUD1-201ENST00000300302 CUTAO60888 179 aa18■□□□□ 0.47
HERPUD1-201ENST00000300302 CMA1P23946 247 aa18■□□□□ 0.47
HERPUD1-201ENST00000300302 JAG1P78504 1218 aa18■□□□□ 0.47
HERPUD1-201ENST00000300302 MAP3K11Q16584 847 aa18■□□□□ 0.47
HERPUD1-201ENST00000300302 AXDND1Q5T1B0 1012 aaPredicted RBP18■□□□□ 0.47
HERPUD1-201ENST00000300302 TYW1BQ6NUM6 668 aa18■□□□□ 0.47
HERPUD1-201ENST00000300302 CDAN1Q8IWY9 1227 aa18■□□□□ 0.47
HERPUD1-201ENST00000300302 KRI1Q8N9T8 703 aaKnown RBP18■□□□□ 0.47
HERPUD1-201ENST00000300302 TSPY26PQ9H489 355 aa18■□□□□ 0.47
HERPUD1-201ENST00000300302 GPRC5DQ9NZD1 345 aa18■□□□□ 0.47
HERPUD1-201ENST00000300302 PCDHB6Q9Y5E3 794 aa18■□□□□ 0.47
HERPUD1-201ENST00000300302 KINO60870 393 aaKnown RBP17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 ATP2B1P20020 1258 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 CAP2P40123 477 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 PIK3AP1Q6ZUJ8 805 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 GOLPH3LQ9H4A5 285 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 JMJD4Q9H9V9 463 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 MORC2Q9Y6X9 1032 aaPredicted RBP17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 SBF1O95248 1867 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 CCDC194A0A1B0GVG4 234 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 ESYT2A0FGR8 921 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 EARS2Q5JPH6 523 aaKnown RBP17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 TTBK2Q6IQ55 1244 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 APOBEC3FQ8IUX4 373 aaKnown RBP17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 TEPSINQ96N21 525 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 SH2D4AQ9H788 454 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 GOPCQ9HD26 462 aa17.99■□□□□ 0.47
HERPUD1-201ENST00000300302 FAM205CA6NFA0 338 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 SMCO2A6NFE2 343 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 M0R2N6 131 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 CTAGE5O15320 804 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 DDNO94850 711 aaPredicted RBP17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 NDUFB10O96000 172 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 ASNSP08243 561 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 CAMK4Q16566 473 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 TTC38Q5R3I4 469 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 PPP1R18Q6NYC8 613 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 ENGASEQ8NFI3 743 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 HOOK2Q96ED9 719 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 DEFB129Q9H1M3 183 aa17.98■□□□□ 0.47
HERPUD1-201ENST00000300302 A0A1B0GVL5 298 aa17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 ZBTB5O15062 677 aa17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 SLC16A2P36021 539 aa17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 SNW1Q13573 536 aaKnown RBP17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 MTMR8Q96EF0 704 aa17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 PCDHA6Q9UN73 950 aa17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 TMX2Q9Y320 296 aa17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 PCDHA8Q9Y5H6 950 aa17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 BMP3P12645 472 aa17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 FMR1NBQ8N0W7 255 aaPredicted RBP17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 GINM1Q9NU53 330 aa17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 SCAF8Q9UPN6 1271 aaKnown RBP17.97■□□□□ 0.47
HERPUD1-201ENST00000300302 A0A1W2PRG0 241 aa17.96■□□□□ 0.47
HERPUD1-201ENST00000300302 USP17L10C9JJH3 530 aa17.96■□□□□ 0.47
HERPUD1-201ENST00000300302 PTPREP23469 700 aa17.96■□□□□ 0.47
HERPUD1-201ENST00000300302 NDUFA8P51970 172 aa17.96■□□□□ 0.47
HERPUD1-201ENST00000300302 RBM43Q6ZSC3 357 aaKnown RBP17.96■□□□□ 0.47
HERPUD1-201ENST00000300302 KRT25Q7Z3Z0 450 aa17.96■□□□□ 0.47
HERPUD1-201ENST00000300302 ASTN2O75129 1339 aaPredicted RBP17.96■□□□□ 0.46
HERPUD1-201ENST00000300302 CCDC192P0DO97 292 aa17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 XRCC6P12956 609 aaKnown RBP eCLIP17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 PFKFB1P16118 471 aa17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 IKQ13123 557 aaPredicted RBP17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 NOM1Q5C9Z4 860 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 ANGEL2Q5VTE6 544 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 DCAF15Q66K64 600 aa17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 ZNF579Q8NAF0 562 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 FBXO2Q9UK22 296 aaPredicted RBP17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 SRPRBQ9Y5M8 271 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 PHF20L1A8MW92 1017 aa17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 GRIN3BO60391 1043 aa17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 LMOD1P29536 600 aaPredicted RBP17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 ECE1P42892 770 aa17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 ADCY7P51828 1080 aa17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 RESP18Q5W5W9 173 aa17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 SHC4Q6S5L8 630 aa17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 REXO1Q8N1G1 1221 aaKnown RBP17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 FERMT2Q96AC1 680 aa17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 COA7Q96BR5 231 aa17.95■□□□□ 0.46
HERPUD1-201ENST00000300302 EPS15P42566 896 aa17.94■□□□□ 0.46
HERPUD1-201ENST00000300302 ZNF174Q15697 407 aa17.94■□□□□ 0.46
HERPUD1-201ENST00000300302 TRPM4Q8TD43 1214 aa17.94■□□□□ 0.46
HERPUD1-201ENST00000300302 RASGRP4Q8TDF6 673 aa17.94■□□□□ 0.46
HERPUD1-201ENST00000300302 ACER1Q8TDN7 264 aa17.94■□□□□ 0.46
HERPUD1-201ENST00000300302 CLIC6Q96NY7 704 aa17.94■□□□□ 0.46
HERPUD1-201ENST00000300302 RBSNQ9H1K0 784 aa17.94■□□□□ 0.46
HERPUD1-201ENST00000300302 FAM13BQ9NYF5 915 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 359.5 ms