RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 PNMA6FA0A0J9YX94 578 aa28.4■■■□□ 2.14
GTF2A1-201ENST00000298173 FAM83BQ5T0W9 1011 aa28.4■■■□□ 2.14
GTF2A1-201ENST00000298173 TYW1BQ6NUM6 668 aa28.4■■■□□ 2.14
GTF2A1-201ENST00000298173 EMILIN3Q9NT22 766 aa28.4■■■□□ 2.14
GTF2A1-201ENST00000298173 AFG3L2Q9Y4W6 797 aa28.4■■■□□ 2.14
GTF2A1-201ENST00000298173 DNM1Q05193 864 aaKnown RBP28.39■■■□□ 2.14
GTF2A1-201ENST00000298173 HOMER1Q86YM7 354 aa28.39■■■□□ 2.14
GTF2A1-201ENST00000298173 GPKOWQ92917 476 aaPredicted RBP eCLIP28.39■■■□□ 2.14
GTF2A1-201ENST00000298173 SEC63Q9UGP8 760 aaKnown RBP28.39■■■□□ 2.14
GTF2A1-201ENST00000298173 BTBD18B2RXH4 712 aa28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 STXBP3O00186 592 aa28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 USP14P54578 494 aa28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 MTMR2Q13614 643 aa28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 BRAPQ7Z569 592 aa28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 DIS3L2Q8IYB7 885 aaKnown RBP28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 FOXP1Q9H334 677 aaPredicted RBP28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 hCG_1984214I3L0E3 225 aa28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 TRAF5O00463 557 aa28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 ZBTB5O15062 677 aa28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 SAFBQ15424 915 aaKnown RBP eCLIP28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 MOB2Q70IA6 237 aa28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 ANKRD13AQ8IZ07 590 aa28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 ZNF713Q8N859 430 aaPredicted RBP28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 CSADQ9Y600 493 aa28.38■■■□□ 2.13
GTF2A1-201ENST00000298173 C19orf81C9J6K1 198 aa28.37■■■□□ 2.13
GTF2A1-201ENST00000298173 WDR46O15213 610 aaKnown RBP28.37■■■□□ 2.13
GTF2A1-201ENST00000298173 STAT2P52630 851 aa28.37■■■□□ 2.13
GTF2A1-201ENST00000298173 SYDE2Q5VT97 1194 aa28.37■■■□□ 2.13
GTF2A1-201ENST00000298173 ISY1Q9ULR0 285 aaKnown RBP28.37■■■□□ 2.13
GTF2A1-201ENST00000298173 PPP1R11O60927 126 aaPredicted RBP28.36■■■□□ 2.13
GTF2A1-201ENST00000298173 HEATR3Q7Z4Q2 680 aa28.36■■■□□ 2.13
GTF2A1-201ENST00000298173 OXER1Q8TDS5 423 aa28.36■■■□□ 2.13
GTF2A1-201ENST00000298173 CHURC1Q8WUH1 139 aa28.36■■■□□ 2.13
GTF2A1-201ENST00000298173 C12orf42Q96LP6 360 aa28.36■■■□□ 2.13
GTF2A1-201ENST00000298173 PRR12Q9ULL5 1215 aa28.36■■■□□ 2.13
GTF2A1-201ENST00000298173 FMR1Q06787 632 aaKnown RBP eCLIP28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 LDLRAD1Q5T700 205 aa28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 ARMC9Q7Z3E5 817 aa28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 FEM1BQ9UK73 627 aa28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 CNPY2Q9Y2B0 182 aa28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 NLRP5P59047 1200 aa28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 DGKZQ13574 1117 aa28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 ATL3Q6DD88 541 aa28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 FAM160B2Q86V87 743 aa28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 CCDC148Q8NFR7 591 aa28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 ZNF526Q8TF50 670 aaPredicted RBP28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 ZMYND12Q9H0C1 365 aa28.35■■■□□ 2.13
GTF2A1-201ENST00000298173 TRIM75PA6NK02 468 aa28.34■■■□□ 2.13
GTF2A1-201ENST00000298173 CALML3P27482 149 aa28.34■■■□□ 2.13
GTF2A1-201ENST00000298173 QRICH1Q2TAL8 776 aa28.34■■■□□ 2.13
GTF2A1-201ENST00000298173 SH3D19Q5HYK7 790 aa28.34■■■□□ 2.13
GTF2A1-201ENST00000298173 GALNT17Q6IS24 598 aa28.34■■■□□ 2.13
GTF2A1-201ENST00000298173 NOSTRINQ8IVI9 506 aa28.34■■■□□ 2.13
GTF2A1-201ENST00000298173 TNFRSF25Q93038 417 aa28.34■■■□□ 2.13
GTF2A1-201ENST00000298173 UNCXA6NJT0 531 aa28.33■■■□□ 2.13
GTF2A1-201ENST00000298173 VCAM1P19320 739 aa28.33■■■□□ 2.13
GTF2A1-201ENST00000298173 KRT2P35908 639 aa28.33■■■□□ 2.13
GTF2A1-201ENST00000298173 KRT85P78386 507 aa28.33■■■□□ 2.13
GTF2A1-201ENST00000298173 NR5A1Q13285 461 aa28.33■■■□□ 2.13
GTF2A1-201ENST00000298173 TTLL12Q14166 644 aaPredicted RBP28.33■■■□□ 2.13
GTF2A1-201ENST00000298173 CDC37Q16543 378 aaPredicted RBP28.33■■■□□ 2.13
GTF2A1-201ENST00000298173 MYSM1Q5VVJ2 828 aa28.33■■■□□ 2.13
GTF2A1-201ENST00000298173 DAGLBQ8NCG7 672 aa28.33■■■□□ 2.13
GTF2A1-201ENST00000298173 CLMNQ96JQ2 1002 aa28.33■■■□□ 2.13
GTF2A1-201ENST00000298173 PTPRFP10586 1907 aa28.33■■■□□ 2.13
GTF2A1-201ENST00000298173 ESYT2A0FGR8 921 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 DDX11L8A8MPP1 907 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 PPATQ06203 517 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 IKQ13123 557 aaPredicted RBP28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 ERO1BQ86YB8 467 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 RBM46Q8TBY0 533 aaKnown RBP28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 CCDC12Q8WUD4 166 aaPredicted RBP28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 PCDHA4Q9UN74 947 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 GOLGA6L22H0YM25 854 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 M0R2N6 131 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 ADAMTS3O15072 1205 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 TMEM87AQ8NBN3 555 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 CNKSR2Q8WXI2 1034 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 COA7Q96BR5 231 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 LMBRD1Q9NUN5 540 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 FBXO28Q9NVF7 368 aa28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 TFIP11Q9UBB9 837 aaKnown RBP28.32■■■□□ 2.12
GTF2A1-201ENST00000298173 SPDYE5A6NIY4 337 aa28.31■■■□□ 2.12
GTF2A1-201ENST00000298173 HMGCS2P54868 508 aa28.31■■■□□ 2.12
GTF2A1-201ENST00000298173 NAPAP54920 295 aa28.31■■■□□ 2.12
GTF2A1-201ENST00000298173 GNL2Q13823 731 aaKnown RBP28.31■■■□□ 2.12
GTF2A1-201ENST00000298173 ELP3Q9H9T3 547 aa28.31■■■□□ 2.12
GTF2A1-201ENST00000298173 BRMS1Q9HCU9 246 aa28.31■■■□□ 2.12
GTF2A1-201ENST00000298173 ITGBL1O95965 494 aaPredicted RBP28.3■■■□□ 2.12
GTF2A1-201ENST00000298173 BLIDQ8IZY5 108 aa28.3■■■□□ 2.12
GTF2A1-201ENST00000298173 ZNF396Q96N95 335 aaPredicted RBP28.3■■■□□ 2.12
GTF2A1-201ENST00000298173 RANBP17Q9H2T7 1088 aaKnown RBP28.3■■■□□ 2.12
GTF2A1-201ENST00000298173 GDPD2Q9HCC8 539 aa28.3■■■□□ 2.12
GTF2A1-201ENST00000298173 CFAP45Q9UL16 551 aa28.3■■■□□ 2.12
GTF2A1-201ENST00000298173 PARP14Q460N5 1801 aa28.3■■■□□ 2.12
GTF2A1-201ENST00000298173 SMCO2A6NFE2 343 aa28.29■■■□□ 2.12
GTF2A1-201ENST00000298173 FKBP1BP68106 108 aa28.29■■■□□ 2.12
GTF2A1-201ENST00000298173 PPP1R18Q6NYC8 613 aa28.29■■■□□ 2.12
GTF2A1-201ENST00000298173 USP28Q96RU2 1077 aa28.29■■■□□ 2.12
GTF2A1-201ENST00000298173 SNAP25P60880 206 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms