RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 TRERF1Q96PN7 1200 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 TAB2Q9NYJ8 693 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 HPCAL4Q9UM19 191 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 KRT86O43790 486 aa21.54■■□□□ 1.04
TRA2A-201ENST00000297071 SHOX2O60902 331 aaPredicted RBP21.54■■□□□ 1.04
TRA2A-201ENST00000297071 SYF2O95926 243 aaKnown RBP21.54■■□□□ 1.04
TRA2A-201ENST00000297071 PARP1P09874 1014 aaKnown RBP21.54■■□□□ 1.04
TRA2A-201ENST00000297071 CYLC1P35663 651 aaPredicted RBP21.54■■□□□ 1.04
TRA2A-201ENST00000297071 DNM2P50570 870 aa21.54■■□□□ 1.04
TRA2A-201ENST00000297071 CORO7P57737 925 aa21.54■■□□□ 1.04
TRA2A-201ENST00000297071 WWC2Q6AWC2 1192 aa21.54■■□□□ 1.04
TRA2A-201ENST00000297071 IPO4Q8TEX9 1081 aaKnown RBP21.54■■□□□ 1.04
TRA2A-201ENST00000297071 DDX17Q92841 729 aaKnown RBP21.54■■□□□ 1.04
TRA2A-201ENST00000297071 PURBQ96QR8 312 aaKnown RBP21.54■■□□□ 1.04
TRA2A-201ENST00000297071 SUGCTQ9HAC7 445 aa21.54■■□□□ 1.04
TRA2A-201ENST00000297071 PRDM11Q9NQV5 511 aa21.54■■□□□ 1.04
TRA2A-201ENST00000297071 KIAA1551Q9HCM1 1747 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 EIF3CLB5ME19 914 aaKnown RBP21.53■■□□□ 1.04
TRA2A-201ENST00000297071 CYP19A1P11511 503 aaPredicted RBP21.53■■□□□ 1.04
TRA2A-201ENST00000297071 GPTP24298 496 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 PPP1R2P41236 205 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 UBXN1Q04323 297 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 ZNF174Q15697 407 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 FIGNQ5HY92 759 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 IQCA1Q86XH1 822 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 IRF2BP1Q8IU81 584 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 C10orf67Q8IYJ2 551 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 CMTR1Q8N1G2 835 aaKnown RBP21.53■■□□□ 1.04
TRA2A-201ENST00000297071 CCDC82Q8N4S0 544 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 EIF3CQ99613 913 aaKnown RBP21.53■■□□□ 1.04
TRA2A-201ENST00000297071 MTRQ99707 1265 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 FAM204AQ9H8W3 233 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 TAOK2Q9UL54 1235 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 SCN7AQ01118 1682 aa21.53■■□□□ 1.04
TRA2A-201ENST00000297071 CICQ96RK0 1608 aaPredicted RBP21.53■■□□□ 1.04
TRA2A-201ENST00000297071 RNF40O75150 1001 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 CPP00450 1065 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 ABL1P00519 1130 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 CASP1P29466 404 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 IFIT1BQ5T764 474 aaKnown RBP21.52■■□□□ 1.04
TRA2A-201ENST00000297071 POTEAQ6S8J7 498 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 CHP1Q99653 195 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 MAGEF1Q9HAY2 307 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 V9GY48 417 aaPredicted RBP21.52■■□□□ 1.04
TRA2A-201ENST00000297071 XIRP1Q702N8 1843 aaKnown RBP21.52■■□□□ 1.04
TRA2A-201ENST00000297071 TTC26A0AVF1 554 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 CLSTN1O94985 981 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 CALML3P27482 149 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 IL6STP40189 918 aaPredicted RBP21.52■■□□□ 1.04
TRA2A-201ENST00000297071 HERVK_113P62684 666 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 STIM1Q13586 685 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 NCAPH2Q6IBW4 605 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 FNBP4Q8N3X1 1017 aaPredicted RBP21.52■■□□□ 1.04
TRA2A-201ENST00000297071 SH3GLB2Q9NR46 395 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 RSPH14Q9UHP6 348 aa21.52■■□□□ 1.04
TRA2A-201ENST00000297071 MAST2Q6P0Q8 1798 aa21.51■■□□□ 1.03
TRA2A-201ENST00000297071 ZNF804BA4D1E1 1349 aa21.51■■□□□ 1.03
TRA2A-201ENST00000297071 SLIT2O94813 1529 aa21.51■■□□□ 1.03
TRA2A-201ENST00000297071 SRGNP10124 158 aa21.51■■□□□ 1.03
TRA2A-201ENST00000297071 PRLRP16471 622 aa21.51■■□□□ 1.03
TRA2A-201ENST00000297071 PRCPP42785 496 aa21.51■■□□□ 1.03
TRA2A-201ENST00000297071 NOP2P46087 812 aaKnown RBP21.51■■□□□ 1.03
TRA2A-201ENST00000297071 PPM1EQ8WY54 764 aa21.51■■□□□ 1.03
TRA2A-201ENST00000297071 PIGBQ92521 554 aa21.51■■□□□ 1.03
TRA2A-201ENST00000297071 TSGA10Q9BZW7 698 aa21.51■■□□□ 1.03
TRA2A-201ENST00000297071 ZNF330Q9Y3S2 320 aaPredicted RBP21.51■■□□□ 1.03
TRA2A-201ENST00000297071 MAGEB6P1A0A0J9YX57 407 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 A0A1W2PQJ5 194 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 A6NNZ2 444 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 WNT7AO00755 349 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 ORC4O43929 436 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 TUBB8Q3ZCM7 444 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 WDR59Q6PJI9 974 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 C4orf32Q8N8J7 132 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 DHTKD1Q96HY7 919 aaPredicted RBP21.5■■□□□ 1.03
TRA2A-201ENST00000297071 TTYH3Q9C0H2 523 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 CUEDC2Q9H467 287 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 ASAP1Q9ULH1 1129 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 GUCA1BQ9UMX6 200 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 TRIM66O15016 1216 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 CDC25AP30304 524 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 TNNT3P45378 269 aaPredicted RBP21.5■■□□□ 1.03
TRA2A-201ENST00000297071 PFKFB3Q16875 520 aaPredicted RBP21.5■■□□□ 1.03
TRA2A-201ENST00000297071 CCDC122Q5T0U0 273 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 CCNI2Q6ZMN8 369 aaPredicted RBP21.5■■□□□ 1.03
TRA2A-201ENST00000297071 AMOTL1Q8IY63 956 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 MMGT1Q8N4V1 131 aa21.5■■□□□ 1.03
TRA2A-201ENST00000297071 BCL9O00512 1426 aa21.49■■□□□ 1.03
TRA2A-201ENST00000297071 RHOBTB3O94955 611 aa21.49■■□□□ 1.03
TRA2A-201ENST00000297071 PLEKHA8P1O95397 391 aa21.49■■□□□ 1.03
TRA2A-201ENST00000297071 SCG2P13521 617 aa21.49■■□□□ 1.03
TRA2A-201ENST00000297071 CYP7A1P22680 504 aa21.49■■□□□ 1.03
TRA2A-201ENST00000297071 HOXA7P31268 230 aaPredicted RBP21.49■■□□□ 1.03
TRA2A-201ENST00000297071 CCDC70Q6NSX1 233 aa21.49■■□□□ 1.03
TRA2A-201ENST00000297071 EFCAB13Q8IY85 973 aa21.49■■□□□ 1.03
TRA2A-201ENST00000297071 RIOK1Q9BRS2 568 aaKnown RBP21.49■■□□□ 1.03
TRA2A-201ENST00000297071 CCSER1Q9C0I3 900 aa21.49■■□□□ 1.03
TRA2A-201ENST00000297071 LRP2BPQ9P2M1 347 aa21.49■■□□□ 1.03
TRA2A-201ENST00000297071 ZBED6P86452 979 aa21.48■■□□□ 1.03
TRA2A-201ENST00000297071 IL17AQ16552 155 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms