RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 PPP1R3GB7ZBB8 358 aa14.08□□□□□ -0.15
TMEM200A-201ENST00000296978 SLC7A5Q01650 507 aa14.08□□□□□ -0.15
TMEM200A-201ENST00000296978 SOGA3Q5TF21 947 aa14.08□□□□□ -0.15
TMEM200A-201ENST00000296978 DZIP1Q86YF9 867 aaKnown RBP14.08□□□□□ -0.15
TMEM200A-201ENST00000296978 RBM28Q9NW13 759 aaKnown RBP14.08□□□□□ -0.15
TMEM200A-201ENST00000296978 TFCP2L1Q9NZI6 479 aa14.08□□□□□ -0.15
TMEM200A-201ENST00000296978 L1RE1Q9UN81 338 aa14.08□□□□□ -0.15
TMEM200A-201ENST00000296978 GOLGB1Q14789 3259 aaKnown RBP14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 KIAA0754O94854 1291 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 TUBBP07437 444 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 CCT5P48643 541 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 SARSP49591 514 aaKnown RBP14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 DPYDQ12882 1025 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 SRLQ86TD4 932 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 C2CD5Q86YS7 1000 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 GPATCH11Q8N954 259 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 LRRIQ3A6PVS8 624 aaPredicted RBP14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 TULP2O00295 520 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 EBAG9O00559 213 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 CALM1P0DP23 149 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 CALM2P0DP24 149 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 CALM3P0DP25 149 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 SCG2P13521 617 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 LIG3P49916 1009 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 CHRNDQ07001 517 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 SECISBP2LQ93073 1101 aaKnown RBP14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 WDR17Q8IZU2 1322 aa14.08□□□□□ -0.16
TMEM200A-201ENST00000296978 WNT7AO00755 349 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 ATP2B2Q01814 1243 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 HLTFQ14527 1009 aaKnown RBP eCLIP14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 ANKRD18AQ8IVF6 992 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 PYM1Q9BRP8 204 aaKnown RBP14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 TUBGCP2Q9BSJ2 902 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 RWDD2AQ9UIY3 292 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 H7C1D1 291 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 RNF225M0QZC1 329 aaPredicted RBP14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 ATP6V1AP38606 617 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 ALX1Q15699 326 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 ZNF658Q5TYW1 1059 aaPredicted RBP14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 DYMQ7RTS9 669 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 SMCR8Q8TEV9 937 aaPredicted RBP14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 CRNKL1Q9BZJ0 848 aaKnown RBP14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 KDM3BQ7LBC6 1761 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 EXOC5O00471 708 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 GOLGA8HP0CJ92 632 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 PTPROQ16827 1216 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 RNF187Q5TA31 235 aaPredicted RBP14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 KCTD16Q68DU8 428 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 KRT26Q7Z3Y9 468 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 TEX2Q8IWB9 1127 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 ZNF444Q8N0Y2 327 aaPredicted RBP14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 ALS2CR12Q96Q35 445 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 MED4Q9NPJ6 270 aa14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 BCCIPQ9P287 314 aaKnown RBP eCLIP14.07□□□□□ -0.16
TMEM200A-201ENST00000296978 CALML3P27482 149 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 ATP1A2P50993 1020 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 MNAT1P51948 309 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 BTG4Q9NY30 223 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 EIF3CLB5ME19 914 aaKnown RBP14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 ARID4AP29374 1257 aaPredicted RBP14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 GGCXP38435 758 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 SETQ01105 290 aaPredicted RBP14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 TRIM28Q13263 835 aaKnown RBP14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 SUSD4Q5VX71 490 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 EIF3CQ99613 913 aaKnown RBP14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 IFIH1Q9BYX4 1025 aaKnown RBP14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 AGPAT5Q9NUQ2 364 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 PRPF3O43395 683 aaKnown RBP14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 BUB1O43683 1085 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 HSF2BPO75031 334 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 NAPAP54920 295 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 MAATS1Q7Z4T9 603 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 BLIDQ8IZY5 108 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 MB21D1Q8N884 522 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 BCAS4Q8TDM0 211 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 NLRC4Q9NPP4 1024 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 LRWD1Q9UFC0 647 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 SAMM50Q9Y512 469 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 DUSP10Q9Y6W6 482 aa14.06□□□□□ -0.16
TMEM200A-201ENST00000296978 ABCC12Q96J65 1359 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 FAM237AA0A1B0GTK4 181 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 TFAP4Q01664 338 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 ODF2Q5BJF6 829 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 CPVLQ9H3G5 476 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 SLC39A2Q9NP94 309 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 MKRN1Q9UHC7 482 aaKnown RBP14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 XDHP47989 1333 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 ARHGAP23Q9P227 1491 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 TCRBV5S4A2TA0A5A2 114 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 CCNT1O60563 726 aaKnown RBP14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 CYP2D6P10635 497 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 KLK7P49862 253 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 MUM1L1Q5H9M0 696 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 RRAGAQ7L523 313 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 TACC3Q9Y6A5 838 aa14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 MED1Q15648 1581 aaPredicted RBP14.05□□□□□ -0.16
TMEM200A-201ENST00000296978 TSPY3P0CV98 308 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 TSPY8P0CW00 308 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 DNM2P50570 870 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 NHEJ1Q9H9Q4 299 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms