RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 TRIM34Q9BYJ4 488 aa13.9□□□□□ -0.18
SDE2-201ENST00000272091 ZMYND12Q9H0C1 365 aa13.9□□□□□ -0.18
SDE2-201ENST00000272091 BRMS1Q9HCU9 246 aa13.9□□□□□ -0.18
SDE2-201ENST00000272091 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.9□□□□□ -0.18
SDE2-201ENST00000272091 CUTAO60888 179 aa13.9□□□□□ -0.18
SDE2-201ENST00000272091 SLC16A2P36021 539 aa13.9□□□□□ -0.18
SDE2-201ENST00000272091 MICALL2Q8IY33 904 aa13.9□□□□□ -0.18
SDE2-201ENST00000272091 TEPSINQ96N21 525 aa13.9□□□□□ -0.18
SDE2-201ENST00000272091 CALML3P27482 149 aa13.9□□□□□ -0.19
SDE2-201ENST00000272091 MAP3K10Q02779 954 aa13.9□□□□□ -0.19
SDE2-201ENST00000272091 SAMD7Q7Z3H4 446 aa13.9□□□□□ -0.19
SDE2-201ENST00000272091 KRI1Q8N9T8 703 aaKnown RBP13.9□□□□□ -0.19
SDE2-201ENST00000272091 TRIM75PA6NK02 468 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 TYRO3Q06418 890 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 KIAA1755Q5JYT7 1200 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 SPECC1Q5M775 1068 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 TTC38Q5R3I4 469 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 TBC1D12O60347 775 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 ZNF174Q15697 407 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 RBM26Q5T8P6 1007 aaKnown RBP13.89□□□□□ -0.19
SDE2-201ENST00000272091 GMCL1P1Q8NEA9 526 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 ERCC4Q92889 916 aaPredicted RBP13.89□□□□□ -0.19
SDE2-201ENST00000272091 FHDC1Q9C0D6 1143 aaPredicted RBP13.89□□□□□ -0.19
SDE2-201ENST00000272091 SPON1Q9HCB6 807 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 SRPRBQ9Y5M8 271 aaKnown RBP13.89□□□□□ -0.19
SDE2-201ENST00000272091 USP17L10C9JJH3 530 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 ZNF202O95125 648 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 C4orf32Q8N8J7 132 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 JMYQ8N9B5 988 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 CCDC148Q8NFR7 591 aa13.89□□□□□ -0.19
SDE2-201ENST00000272091 PPP4R3BQ5MIZ7 849 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 SLFN13Q68D06 897 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 MIGA2Q7L4E1 593 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 FAM177A1Q8N128 213 aaPredicted RBP13.88□□□□□ -0.19
SDE2-201ENST00000272091 DCAF4Q8WV16 495 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 DPF2Q92785 391 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 COA7Q96BR5 231 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 NAPAP54920 295 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 IL17AQ16552 155 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 GPATCH4Q5T3I0 446 aaKnown RBP13.88□□□□□ -0.19
SDE2-201ENST00000272091 NUP88Q99567 741 aaPredicted RBP13.88□□□□□ -0.19
SDE2-201ENST00000272091 GJA3Q9Y6H8 435 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 A0A087WWV3 80 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 KINO60870 393 aaKnown RBP13.88□□□□□ -0.19
SDE2-201ENST00000272091 ECE1P42892 770 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 CCDC96Q2M329 555 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 GALNT17Q6IS24 598 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 USP49Q70CQ1 688 aa13.88□□□□□ -0.19
SDE2-201ENST00000272091 CNOT7Q9UIV1 285 aaKnown RBP13.88□□□□□ -0.19
SDE2-201ENST00000272091 NDUFB10O96000 172 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 CCDC192P0DO97 292 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 ATP2C1P98194 919 aaPredicted RBP13.87□□□□□ -0.19
SDE2-201ENST00000272091 TBC1D10BQ4KMP7 808 aaPredicted RBP13.87□□□□□ -0.19
SDE2-201ENST00000272091 CSRNP2Q9H175 543 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
SDE2-201ENST00000272091 ZBTB21Q9ULJ3 1066 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 SMCO2A6NFE2 343 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 F5H6K3 240 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 MYO1BO43795 1136 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 TRAPPC10P48553 1259 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 KLRC3Q07444 240 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 RASA3Q14644 834 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
SDE2-201ENST00000272091 ACER1Q8TDN7 264 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 NOL7Q9UMY1 257 aaKnown RBP13.87□□□□□ -0.19
SDE2-201ENST00000272091 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.87□□□□□ -0.19
SDE2-201ENST00000272091 ESYT2A0FGR8 921 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 PHF20L1A8MW92 1017 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 MMP14P50281 582 aa13.87□□□□□ -0.19
SDE2-201ENST00000272091 PNMA6FA0A0J9YX94 578 aa13.86□□□□□ -0.19
SDE2-201ENST00000272091 EDIL3O43854 480 aa13.86□□□□□ -0.19
SDE2-201ENST00000272091 GMCL1Q96IK5 515 aa13.86□□□□□ -0.19
SDE2-201ENST00000272091 CEP131Q9UPN4 1083 aa13.86□□□□□ -0.19
SDE2-201ENST00000272091 TMEM260Q9NX78 707 aa13.86□□□□□ -0.19
SDE2-201ENST00000272091 A0A087X0B3 334 aa13.86□□□□□ -0.19
SDE2-201ENST00000272091 hCG_1984214I3L0E3 225 aa13.86□□□□□ -0.19
SDE2-201ENST00000272091 CTAGE5O15320 804 aa13.86□□□□□ -0.19
SDE2-201ENST00000272091 PTGDRQ13258 359 aa13.86□□□□□ -0.19
SDE2-201ENST00000272091 ZNF713Q8N859 430 aaPredicted RBP13.86□□□□□ -0.19
SDE2-201ENST00000272091 CAP2P40123 477 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 SLC1A4P43007 532 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 SYKP43405 635 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 INF2Q27J81 1249 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 ANO6Q4KMQ2 910 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 HACL1Q9UJ83 578 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 ZBTB5O15062 677 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 MCM7P33993 719 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 LONRF3Q496Y0 759 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 TIGD1Q96MW7 591 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 PPP1R9BQ96SB3 815 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 GLIS2Q9BZE0 524 aaPredicted RBP13.85□□□□□ -0.19
SDE2-201ENST00000272091 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
SDE2-201ENST00000272091 KCNH3Q9ULD8 1083 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 AP5Z1O43299 807 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 KIF4BQ2VIQ3 1234 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 TRPM4Q8TD43 1214 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 DOCK1Q14185 1865 aa13.85□□□□□ -0.19
SDE2-201ENST00000272091 ARHGAP27Q6ZUM4 889 aa13.84□□□□□ -0.19
SDE2-201ENST00000272091 C11orf57Q6ZUT1 292 aaPredicted RBP13.84□□□□□ -0.19
SDE2-201ENST00000272091 CCDC84Q86UT8 332 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms