RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 KCNK3O14649 394 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 RGS16O15492 202 aaPredicted RBP11.26□□□□□ -0.61
LAMA3-201ENST00000269217 YWHAEP62258 255 aaKnown RBP11.26□□□□□ -0.61
LAMA3-201ENST00000269217 TAF12Q16514 161 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 ZSCAN26Q16670 478 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 OTUD6AQ7L8S5 288 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 CCT6BQ92526 530 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
LAMA3-201ENST00000269217 RNF34Q969K3 372 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 UIMC1Q96RL1 719 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 DBNLQ9UJU6 430 aaKnown RBP11.26□□□□□ -0.61
LAMA3-201ENST00000269217 NEO1Q92859 1461 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 GYG1P46976 350 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 BCAMP50895 628 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 AFAP1L2Q8N4X5 818 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 TEKT1Q969V4 418 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 GSDMAQ96QA5 445 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 FOXP1Q9H334 677 aaPredicted RBP11.26□□□□□ -0.61
LAMA3-201ENST00000269217 METTL14Q9HCE5 456 aaKnown RBP11.26□□□□□ -0.61
LAMA3-201ENST00000269217 PANK4Q9NVE7 773 aa11.26□□□□□ -0.61
LAMA3-201ENST00000269217 CARMIL3Q8ND23 1372 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 TSNAXIP1Q2TAA8 658 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 MIER3Q7Z3K6 550 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 CCDC117Q8IWD4 279 aaPredicted RBP11.25□□□□□ -0.61
LAMA3-201ENST00000269217 P3H4Q92791 437 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 EPN1Q9Y6I3 576 aaPredicted RBP11.25□□□□□ -0.61
LAMA3-201ENST00000269217 KRIT1O00522 736 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 ALDH1B1P30837 517 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 PDE6BP35913 854 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 IRX5P78411 483 aaPredicted RBP11.25□□□□□ -0.61
LAMA3-201ENST00000269217 PTGDRQ13258 359 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 GEN1Q17RS7 908 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 BRDTQ58F21 947 aaPredicted RBP11.25□□□□□ -0.61
LAMA3-201ENST00000269217 UNC5CLQ8IV45 518 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 ARHGEF2Q92974 986 aaKnown RBP11.25□□□□□ -0.61
LAMA3-201ENST00000269217 GDAP1L1Q96MZ0 367 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 GJA3Q9Y6H8 435 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 CFAP65Q6ZU64 1925 aaKnown RBP11.25□□□□□ -0.61
LAMA3-201ENST00000269217 RNF40O75150 1001 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 COPB1P53618 953 aaKnown RBP11.25□□□□□ -0.61
LAMA3-201ENST00000269217 PNMA8AQ86V59 439 aaPredicted RBP11.25□□□□□ -0.61
LAMA3-201ENST00000269217 LARGE2Q8N3Y3 721 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 CCDC24Q8N4L8 307 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 CCDC89Q8N998 374 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 TSC1Q92574 1164 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 MED4Q9NPJ6 270 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 MAP3K15Q6ZN16 1313 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 IKBKBO14920 756 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 CRCPO75575 148 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 PDE8BO95263 885 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 TNNI1P19237 187 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 TRAPPC10P48553 1259 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 GUCY2FP51841 1108 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 CUEDC2Q9H467 287 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 PYCARDQ9ULZ3 195 aa11.25□□□□□ -0.61
LAMA3-201ENST00000269217 CYP2J2P51589 502 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 NLRX1Q86UT6 975 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 RDH13Q8NBN7 331 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 NSUN7Q8NE18 718 aaKnown RBP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 GRK7Q8WTQ7 553 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 VCX3BQ9H321 246 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 PCDHA5Q9Y5H7 936 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 LAD1O00515 517 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 CYP21A2P08686 494 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 GTF2IP78347 998 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 SDCCAG8Q86SQ7 713 aaPredicted RBP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 RNF26Q9BY78 433 aaPredicted RBP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 STK32BQ9NY57 414 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 MYO5CQ9NQX4 1742 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 IGSF1Q8N6C5 1336 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 TBC1D8O95759 1140 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 ABCB4P21439 1286 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 GNGT1P63211 74 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 TRIM6Q9C030 488 aaPredicted RBP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 VPS37BQ9H9H4 285 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 HOMER3Q9NSC5 361 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 ATP2B4P23634 1241 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 CHRNDQ07001 517 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 PRR16Q569H4 304 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 FAM26FQ5R3K3 315 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 SPATS2Q86XZ4 545 aaKnown RBP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 RABGGTAQ92696 567 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 GPKOWQ92917 476 aaPredicted RBP eCLIP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 PPP1R13BQ96KQ4 1090 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 PPANQ9NQ55 473 aaKnown RBP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 DDX25Q9UHL0 483 aaKnown RBP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 CEP170Q5SW79 1584 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 FMNL1O95466 1100 aaPredicted RBP11.24□□□□□ -0.61
LAMA3-201ENST00000269217 STX2P32856 288 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 APOA5Q6Q788 366 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 FAM71BQ8TC56 605 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 TBC1D31Q96DN5 1066 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 COL4A3BPQ9Y5P4 624 aa11.24□□□□□ -0.61
LAMA3-201ENST00000269217 CFAP74Q9C0B2 1584 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 TRIM37O94972 964 aa11.23□□□□□ -0.61
LAMA3-201ENST00000269217 KRT19P08727 400 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms