RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 HOMER2Q9NSB8 354 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 KIAA1468Q9P260 1216 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 MAD2L2Q9UI95 211 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 CAVIN2O95810 425 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 TRAF1Q13077 416 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 GALNT17Q6IS24 598 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 NEK8Q86SG6 692 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 CCDC84Q86UT8 332 aaPredicted RBP10.57□□□□□ -0.72
SSR3-201ENST00000265044 FBXO11Q86XK2 927 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 ADGRF4Q8IZF3 695 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 TBCKQ8TEA7 893 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 CHURC1Q8WUH1 139 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 FAM151AQ8WW52 585 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 BMP2KQ9NSY1 1161 aaPredicted RBP10.57□□□□□ -0.72
SSR3-201ENST00000265044 HERC5Q9UII4 1024 aaKnown RBP10.57□□□□□ -0.72
SSR3-201ENST00000265044 NEMFO60524 1076 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 SHMT1P34896 483 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 PLS1Q14651 629 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 UBE2SQ16763 222 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 DPY19L2Q6NUT2 758 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 PHF20Q9BVI0 1012 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 CBX8Q9HC52 389 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 BARHL2Q9NY43 387 aa10.57□□□□□ -0.72
SSR3-201ENST00000265044 COL5A3P25940 1745 aaPredicted RBP10.56□□□□□ -0.72
SSR3-201ENST00000265044 TCHHQ07283 1943 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 STIM1Q13586 685 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 EAPPQ56P03 285 aaPredicted RBP10.56□□□□□ -0.72
SSR3-201ENST00000265044 WDR78Q5VTH9 848 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 DCAF15Q66K64 600 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 NAP1L5Q96NT1 182 aaPredicted RBP10.56□□□□□ -0.72
SSR3-201ENST00000265044 AMNQ9BXJ7 453 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 RNF181Q9P0P0 153 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 FAM198AQ9UFP1 575 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 MKRN1Q9UHC7 482 aaKnown RBP10.56□□□□□ -0.72
SSR3-201ENST00000265044 BRWD3Q6RI45 1802 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 BAZ2AQ9UIF9 1905 aaKnown RBP10.56□□□□□ -0.72
SSR3-201ENST00000265044 DDX60Q8IY21 1712 aaKnown RBP10.56□□□□□ -0.72
SSR3-201ENST00000265044 PNMA6FA0A0J9YX94 578 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 ASNSP08243 561 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 FGRP09769 529 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 VEGFAP15692 232 aaPredicted RBP10.56□□□□□ -0.72
SSR3-201ENST00000265044 PKN1Q16512 942 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 CDC37Q16543 378 aaPredicted RBP10.56□□□□□ -0.72
SSR3-201ENST00000265044 SYMPKQ92797 1274 aaKnown RBP10.56□□□□□ -0.72
SSR3-201ENST00000265044 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 CICQ96RK0 1608 aaPredicted RBP10.56□□□□□ -0.72
SSR3-201ENST00000265044 ESPNB1AK53 854 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 ZNF543Q08ER8 600 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 ZNF341Q9BYN7 854 aa10.56□□□□□ -0.72
SSR3-201ENST00000265044 MYH13Q9UKX3 1938 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 TECP42680 631 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 TRAPPC10P48553 1259 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 STAT2P52630 851 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 KIF4BQ2VIQ3 1234 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 KRT79Q5XKE5 535 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 ILDR1Q86SU0 546 aaPredicted RBP10.55□□□□□ -0.72
SSR3-201ENST00000265044 PCMTD1Q96MG8 357 aaPredicted RBP10.55□□□□□ -0.72
SSR3-201ENST00000265044 PYM1Q9BRP8 204 aaKnown RBP10.55□□□□□ -0.72
SSR3-201ENST00000265044 SPZ1Q9BXG8 430 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 IDI2Q9BXS1 227 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 ZNF408Q9H9D4 720 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 CD2APQ9Y5K6 639 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 SCN7AQ01118 1682 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 PALM3A6NDB9 673 aaPredicted RBP10.55□□□□□ -0.72
SSR3-201ENST00000265044 WNT10BO00744 389 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 ZBTB5O15062 677 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 VIL1P09327 827 aaKnown RBP10.55□□□□□ -0.72
SSR3-201ENST00000265044 NF2P35240 595 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 STX17P56962 302 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 POSTNQ15063 836 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 CALCRLQ16602 461 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 KRBA2Q6ZNG9 492 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 SULF1Q8IWU6 871 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 SH3GLB2Q9NR46 395 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 MYH2Q9UKX2 1941 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 MYO5AQ9Y4I1 1855 aaKnown RBP10.55□□□□□ -0.72
SSR3-201ENST00000265044 PTPREP23469 700 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 FKBP1AP62942 108 aaKnown RBP10.55□□□□□ -0.72
SSR3-201ENST00000265044 LONRF3Q496Y0 759 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 FAM83BQ5T0W9 1011 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 HOOK2Q96ED9 719 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 LRWD1Q9UFC0 647 aa10.55□□□□□ -0.72
SSR3-201ENST00000265044 SRPRBQ9Y5M8 271 aaKnown RBP10.55□□□□□ -0.72
SSR3-201ENST00000265044 USP17L15C9J2P7 530 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 USP17L13C9JLJ4 530 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 USP17L11C9JVI0 530 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 USP17L18D6R9N7 530 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 USP17L22D6RA61 530 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 USP17L17D6RBQ6 530 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 USP17L19D6RCP7 530 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 USP17L20D6RJB6 530 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 FLOT1O75955 427 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 NDUFB10O96000 172 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 USP17L24Q0WX57 530 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 SYDE2Q5VT97 1194 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 USP17L6PQ6QN14 398 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 GRAMD1CQ8IYS0 662 aa10.54□□□□□ -0.72
SSR3-201ENST00000265044 DCPSQ96C86 337 aaKnown RBP10.54□□□□□ -0.72
SSR3-201ENST00000265044 ZNF830Q96NB3 372 aaPredicted RBP10.54□□□□□ -0.72
SSR3-201ENST00000265044 MRIQ9BWK5 157 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms