RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 RPS6KA2Q15349 733 aa19.78■□□□□ 0.76
COL5A3-201ENST00000264828 XRCC5P13010 732 aaKnown RBP19.78■□□□□ 0.76
COL5A3-201ENST00000264828 STAT1P42224 750 aa19.78■□□□□ 0.76
COL5A3-201ENST00000264828 PPARAQ07869 468 aa19.78■□□□□ 0.76
COL5A3-201ENST00000264828 LRRC8AQ8IWT6 810 aa19.78■□□□□ 0.76
COL5A3-201ENST00000264828 ZNF408Q9H9D4 720 aa19.78■□□□□ 0.76
COL5A3-201ENST00000264828 GNA14O95837 355 aa19.78■□□□□ 0.76
COL5A3-201ENST00000264828 ATF7P17544 494 aaPredicted RBP19.78■□□□□ 0.76
COL5A3-201ENST00000264828 GPHNQ9NQX3 736 aaPredicted RBP19.78■□□□□ 0.76
COL5A3-201ENST00000264828 TPX2Q9ULW0 747 aaKnown RBP19.78■□□□□ 0.76
COL5A3-201ENST00000264828 TRIM35Q9UPQ4 493 aa19.78■□□□□ 0.76
COL5A3-201ENST00000264828 ARHGEF5Q12774 1597 aa19.78■□□□□ 0.76
COL5A3-201ENST00000264828 PTH1RQ03431 593 aa19.77■□□□□ 0.76
COL5A3-201ENST00000264828 CLIC6Q96NY7 704 aa19.77■□□□□ 0.76
COL5A3-201ENST00000264828 ANO3Q9BYT9 981 aa19.77■□□□□ 0.76
COL5A3-201ENST00000264828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.77■□□□□ 0.76
COL5A3-201ENST00000264828 USP28Q96RU2 1077 aa19.77■□□□□ 0.76
COL5A3-201ENST00000264828 ZBED4O75132 1171 aa19.77■□□□□ 0.76
COL5A3-201ENST00000264828 THAP12O43422 761 aa19.77■□□□□ 0.76
COL5A3-201ENST00000264828 POLR2FP61218 127 aaKnown RBP19.77■□□□□ 0.76
COL5A3-201ENST00000264828 BCAS4Q8TDM0 211 aa19.77■□□□□ 0.76
COL5A3-201ENST00000264828 SCYL1Q96KG9 808 aa19.77■□□□□ 0.76
COL5A3-201ENST00000264828 RPGRIP1Q96KN7 1286 aa19.77■□□□□ 0.75
COL5A3-201ENST00000264828 LZTS2Q9BRK4 669 aa19.77■□□□□ 0.75
COL5A3-201ENST00000264828 SAT1P21673 171 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 PHBP35232 272 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 NAA35Q5VZE5 725 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 KAZNQ674X7 775 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 MYOCDQ8IZQ8 938 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 PDE11AQ9HCR9 933 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 CLTAP09496 248 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 GOLGA8FQ08AF8 430 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 GOLGA8DPQ0D2H9 430 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 PKP1Q13835 747 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 RIOK1Q9BRS2 568 aaKnown RBP19.76■□□□□ 0.75
COL5A3-201ENST00000264828 FANCLQ9NW38 375 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 STAM2O75886 525 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 ZNF654Q8IZM8 581 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 CHAMP1Q96JM3 812 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 KCTD16Q68DU8 428 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 GPT2Q8TD30 523 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 PANK4Q9NVE7 773 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 NEO1Q92859 1461 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 SEC31AO94979 1220 aaKnown RBP19.76■□□□□ 0.75
COL5A3-201ENST00000264828 DSCC1Q9BVC3 393 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 RIC8AQ9NPQ8 531 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 TMEM2Q9UHN6 1383 aa19.76■□□□□ 0.75
COL5A3-201ENST00000264828 PER1O15534 1290 aaPredicted RBP19.75■□□□□ 0.75
COL5A3-201ENST00000264828 EFCAB8A8MWE9 144 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 HIP1RO75146 1068 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 MED10Q9BTT4 135 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 TPCN1Q9ULQ1 816 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 GAS7O60861 476 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 GRK7Q8WTQ7 553 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 MIER3Q7Z3K6 550 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 DNM2P50570 870 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 GCKRQ14397 625 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 PTPN21Q16825 1174 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 PHLDB3Q6NSJ2 640 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 NOSTRINQ8IVI9 506 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 NT5C3AQ9H0P0 336 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 HOMER3Q9NSC5 361 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 PTPN22Q9Y2R2 807 aa19.75■□□□□ 0.75
COL5A3-201ENST00000264828 GSPT1P15170 499 aaKnown RBP19.74■□□□□ 0.75
COL5A3-201ENST00000264828 FAM71BQ8TC56 605 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 KDM3AQ9Y4C1 1321 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 A0A0D9SFI3 127 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 HOXB7P09629 217 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 YARSP54577 528 aaKnown RBP19.74■□□□□ 0.75
COL5A3-201ENST00000264828 CFAP61Q8NHU2 1237 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 CLIC4Q9Y696 253 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 CFAP65Q6ZU64 1925 aaKnown RBP19.74■□□□□ 0.75
COL5A3-201ENST00000264828 NDUFA8P51970 172 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 COG7P83436 770 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 DACT3Q96B18 629 aaPredicted RBP19.74■□□□□ 0.75
COL5A3-201ENST00000264828 SLC39A2Q9NP94 309 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 SMIM24O75264 130 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 PEX19P40855 299 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 RBBP5Q15291 538 aaKnown RBP19.74■□□□□ 0.75
COL5A3-201ENST00000264828 PRR16Q569H4 304 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 STAG1Q8WVM7 1258 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 GPKOWQ92917 476 aaPredicted RBP eCLIP19.74■□□□□ 0.75
COL5A3-201ENST00000264828 USP21Q9UK80 565 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 PYCARDQ9ULZ3 195 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 KDRP35968 1356 aa19.74■□□□□ 0.75
COL5A3-201ENST00000264828 BCAP29Q9UHQ4 241 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 PALD1Q9ULE6 856 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 RSPH3Q86UC2 560 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 DEPTORQ8TB45 409 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 K7ENM7 598 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 SERPINB6P35237 376 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 CCT5P48643 541 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 PPP2R5BQ15173 497 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 MAST3O60307 1309 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 MROH5Q6ZUA9 1318 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 WDR46O15213 610 aaKnown RBP19.73■□□□□ 0.75
COL5A3-201ENST00000264828 DPP8Q6V1X1 898 aaPredicted RBP19.73■□□□□ 0.75
COL5A3-201ENST00000264828 TRIM50Q86XT4 487 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 BLIDQ8IZY5 108 aa19.73■□□□□ 0.75
COL5A3-201ENST00000264828 ATF2P15336 505 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms