RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 XDHP47989 1333 aa22.18■■□□□ 1.14
CSPG5-201ENST00000264723 TRIM49BA6NDI0 452 aa22.18■■□□□ 1.14
CSPG5-201ENST00000264723 PP2D1A8MPX8 630 aa22.18■■□□□ 1.14
CSPG5-201ENST00000264723 PLS1Q14651 629 aa22.18■■□□□ 1.14
CSPG5-201ENST00000264723 TBCAO75347 108 aaKnown RBP22.18■■□□□ 1.14
CSPG5-201ENST00000264723 RPN1P04843 607 aaKnown RBP22.18■■□□□ 1.14
CSPG5-201ENST00000264723 SYCP3Q8IZU3 236 aa22.18■■□□□ 1.14
CSPG5-201ENST00000264723 REXO1Q8N1G1 1221 aaKnown RBP22.18■■□□□ 1.14
CSPG5-201ENST00000264723 BCCIPQ9P287 314 aaKnown RBP eCLIP22.18■■□□□ 1.14
CSPG5-201ENST00000264723 THRAP3Q9Y2W1 955 aaKnown RBP22.18■■□□□ 1.14
CSPG5-201ENST00000264723 COPB1P53618 953 aaKnown RBP22.17■■□□□ 1.14
CSPG5-201ENST00000264723 TNIP1Q15025 636 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 LRWD1Q9UFC0 647 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 HDAC9Q9UKV0 1011 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 TMCO5BA8MYB1 307 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 ATP2B4P23634 1241 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 IQCEQ6IPM2 695 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 USP17L2Q6R6M4 530 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 FAM114A1Q8IWE2 563 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 TBC1D22AQ8WUA7 517 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 VGLL3A8MV65 326 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 CHMP2AO43633 222 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 LONRF2Q1L5Z9 754 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 JAKMIP2Q96AA8 810 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 NLRC4Q9NPP4 1024 aa22.17■■□□□ 1.14
CSPG5-201ENST00000264723 KRT83P78385 493 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 NCAPHQ15003 741 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 NCAPH2Q6IBW4 605 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 TYW1BQ6NUM6 668 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 FAM84BQ96KN1 310 aaPredicted RBP22.16■■□□□ 1.14
CSPG5-201ENST00000264723 NARFQ9UHQ1 456 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 C3P01024 1663 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 CYP27A1Q02318 531 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 SP4Q02446 784 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 ZNF34Q8IZ26 560 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 TRIML1Q8N9V2 468 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 TAF4BQ92750 862 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 SPAG5Q96R06 1193 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 SLC39A2Q9NP94 309 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 TRPC5Q9UL62 973 aaPredicted RBP22.16■■□□□ 1.14
CSPG5-201ENST00000264723 B4DLN1 442 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 UTP14CQ5TAP6 766 aaKnown RBP22.16■■□□□ 1.14
CSPG5-201ENST00000264723 OR8K1Q8NGG5 319 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 IFT81Q8WYA0 676 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 FBXO2Q9UK22 296 aaPredicted RBP22.16■■□□□ 1.14
CSPG5-201ENST00000264723 PHLPP2Q6ZVD8 1323 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 WTIPA6NIX2 430 aaPredicted RBP22.16■■□□□ 1.14
CSPG5-201ENST00000264723 SV2BQ7L1I2 683 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 SNX29Q8TEQ0 813 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 AGXT2Q9BYV1 514 aa22.16■■□□□ 1.14
CSPG5-201ENST00000264723 EPN1Q9Y6I3 576 aaPredicted RBP22.16■■□□□ 1.14
CSPG5-201ENST00000264723 ERCC5P28715 1186 aaPredicted RBP22.15■■□□□ 1.14
CSPG5-201ENST00000264723 LARGE2Q8N3Y3 721 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 TEKT1Q969V4 418 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 BPIFA3Q9BQP9 254 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 KRT31Q15323 416 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 GSDMAQ96QA5 445 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 MST1RQ04912 1400 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 TRAF5O00463 557 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 PTPAQ15257 358 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 NKX1-1Q15270 411 aaPredicted RBP22.15■■□□□ 1.14
CSPG5-201ENST00000264723 CABP7Q86V35 215 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 SGMS1Q86VZ5 419 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 ERMNQ8TAM6 284 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 ARHGAP23Q9P227 1491 aa22.15■■□□□ 1.14
CSPG5-201ENST00000264723 CAMTA2O94983 1202 aa22.14■■□□□ 1.14
CSPG5-201ENST00000264723 NELFCDQ8IXH7 590 aa22.14■■□□□ 1.14
CSPG5-201ENST00000264723 LEMD3Q9Y2U8 911 aa22.14■■□□□ 1.14
CSPG5-201ENST00000264723 TUBE1Q9UJT0 475 aa22.14■■□□□ 1.13
CSPG5-201ENST00000264723 TACC1O75410 805 aa22.14■■□□□ 1.13
CSPG5-201ENST00000264723 CACNB3P54284 484 aa22.14■■□□□ 1.13
CSPG5-201ENST00000264723 TTLL12Q14166 644 aaPredicted RBP22.14■■□□□ 1.13
CSPG5-201ENST00000264723 C2CD5Q86YS7 1000 aa22.14■■□□□ 1.13
CSPG5-201ENST00000264723 STAG1Q8WVM7 1258 aa22.14■■□□□ 1.13
CSPG5-201ENST00000264723 ALS2CR12Q96Q35 445 aa22.14■■□□□ 1.13
CSPG5-201ENST00000264723 CDC23Q9UJX2 597 aa22.14■■□□□ 1.13
CSPG5-201ENST00000264723 ZBTB22O15209 634 aa22.13■■□□□ 1.13
CSPG5-201ENST00000264723 ADCY7P51828 1080 aa22.13■■□□□ 1.13
CSPG5-201ENST00000264723 PRPF4BQ13523 1007 aaKnown RBP22.13■■□□□ 1.13
CSPG5-201ENST00000264723 SH3RF3Q8TEJ3 882 aaPredicted RBP22.13■■□□□ 1.13
CSPG5-201ENST00000264723 SLC16A2P36021 539 aa22.13■■□□□ 1.13
CSPG5-201ENST00000264723 CPXCR1Q8N123 301 aa22.13■■□□□ 1.13
CSPG5-201ENST00000264723 FNBP4Q8N3X1 1017 aaPredicted RBP22.13■■□□□ 1.13
CSPG5-201ENST00000264723 MRPL44Q9H9J2 332 aaKnown RBP22.13■■□□□ 1.13
CSPG5-201ENST00000264723 MORC2Q9Y6X9 1032 aaPredicted RBP22.13■■□□□ 1.13
CSPG5-201ENST00000264723 ANKRD65E5RJM6 399 aa22.13■■□□□ 1.13
CSPG5-201ENST00000264723 PPIP5K2O43314 1243 aa22.13■■□□□ 1.13
CSPG5-201ENST00000264723 SRGAP2O75044 1071 aa22.13■■□□□ 1.13
CSPG5-201ENST00000264723 BBXQ8WY36 941 aaPredicted RBP22.13■■□□□ 1.13
CSPG5-201ENST00000264723 SRGAP1Q7Z6B7 1085 aa22.12■■□□□ 1.13
CSPG5-201ENST00000264723 MYO6Q9UM54 1294 aa22.12■■□□□ 1.13
CSPG5-201ENST00000264723 GTPBP6O43824 516 aaPredicted RBP22.12■■□□□ 1.13
CSPG5-201ENST00000264723 TOB1P50616 345 aaPredicted RBP22.12■■□□□ 1.13
CSPG5-201ENST00000264723 CALCRLQ16602 461 aa22.12■■□□□ 1.13
CSPG5-201ENST00000264723 KRT25Q7Z3Z0 450 aa22.12■■□□□ 1.13
CSPG5-201ENST00000264723 JDP2Q8WYK2 163 aa22.12■■□□□ 1.13
CSPG5-201ENST00000264723 SLIT1O75093 1534 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 RABGGTAQ92696 567 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 PLA2G12BQ9BX93 195 aa22.11■■□□□ 1.13
CSPG5-201ENST00000264723 TFR2Q9UP52 801 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms