RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 MYO1AQ9UBC5 1043 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 NALCNQ8IZF0 1738 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 USP54Q70EL1 1684 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 F6X3S4 739 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 KDM1AO60341 852 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 E2F6O75461 281 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 ECEL1O95672 775 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 LTKP29376 864 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 SH2D4AQ9H788 454 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 CNGB3Q9NQW8 809 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 NOVA2Q9UNW9 492 aaKnown RBP11.73□□□□□ -0.53
KPNA3-201ENST00000261667 CPSF1Q10570 1443 aaKnown RBP11.73□□□□□ -0.53
KPNA3-201ENST00000261667 ARHGAP42A6NI28 874 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 LSM1O15116 133 aaKnown RBP11.73□□□□□ -0.53
KPNA3-201ENST00000261667 SGSM2O43147 1006 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 SARM1Q6SZW1 724 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 Q6ZUG5 572 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 SUGCTQ9HAC7 445 aa11.73□□□□□ -0.53
KPNA3-201ENST00000261667 MCF2LO15068 1137 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 MECOMQ03112 1051 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 CYLC2Q14093 348 aaPredicted RBP11.72□□□□□ -0.53
KPNA3-201ENST00000261667 TTC39AQ5SRH9 613 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 RINLQ6ZS11 566 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 POLD4Q9HCU8 107 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 FRMD4BQ9Y2L6 1034 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 CCDC61Q9Y6R9 512 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 PTCH1Q13635 1447 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 A0A1W2PP64 1363 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 KLHL33A6NCF5 533 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 ATP6V1G1O75348 118 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 IQUBQ8NA54 791 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 PIP4K2CQ8TBX8 421 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 NOX5Q96PH1 765 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 MARF1Q9Y4F3 1742 aaKnown RBP11.72□□□□□ -0.53
KPNA3-201ENST00000261667 TSPY2A6NKD2 308 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 TRPA1O75762 1119 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 TSPY3P0CV98 308 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 TSPY8P0CW00 308 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 KCNA3P22001 575 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 TSPY1Q01534 308 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 ROR2Q01974 943 aaKnown RBP11.72□□□□□ -0.53
KPNA3-201ENST00000261667 BEND3Q5T5X7 828 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 C16orf87Q6PH81 154 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 KSR1Q8IVT5 923 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 CCDC51Q96ER9 411 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 EPN3Q9H201 632 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 MTMR7Q9Y216 660 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 PTPDC1A2A3K4 754 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 AHCYL1O43865 530 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 CCND1P24385 295 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 MAP3K7CLP57077 242 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 C2orf54Q08AI8 447 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 EVI5LQ96CN4 794 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 IQCDQ96DY2 449 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 USP28Q96RU2 1077 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 TSG101Q99816 390 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 EPB41L5Q9HCM4 733 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 MRGBPQ9NV56 204 aa11.72□□□□□ -0.53
KPNA3-201ENST00000261667 PDE5AO76074 875 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 STMN1P16949 149 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 BEND6Q5SZJ8 279 aaPredicted RBP11.71□□□□□ -0.53
KPNA3-201ENST00000261667 EMBQ6PCB8 327 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 SIX5Q8N196 739 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 MLKLQ8NB16 471 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 UHMK1Q8TAS1 419 aaKnown RBP11.71□□□□□ -0.53
KPNA3-201ENST00000261667 GFM2Q969S9 779 aaKnown RBP11.71□□□□□ -0.53
KPNA3-201ENST00000261667 NUDCD1Q96RS6 583 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 BMP2KQ9NSY1 1161 aaPredicted RBP11.71□□□□□ -0.53
KPNA3-201ENST00000261667 ECHDC1Q9NTX5 307 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 HYOU1Q9Y4L1 999 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 SNX14Q9Y5W7 946 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 TCP1P17987 556 aaKnown RBP11.71□□□□□ -0.53
KPNA3-201ENST00000261667 MAGEA1P43355 309 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 CEBPAP49715 358 aaPredicted RBP11.71□□□□□ -0.53
KPNA3-201ENST00000261667 USP4Q13107 963 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 INAQ16352 499 aa11.71□□□□□ -0.53
KPNA3-201ENST00000261667 E4F1Q66K89 784 aaPredicted RBP11.71□□□□□ -0.53
KPNA3-201ENST00000261667 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.71□□□□□ -0.53
KPNA3-201ENST00000261667 BICDL2A1A5D9 508 aa11.71□□□□□ -0.54
KPNA3-201ENST00000261667 VCAM1P19320 739 aa11.71□□□□□ -0.54
KPNA3-201ENST00000261667 TPD52P55327 224 aaPredicted RBP11.71□□□□□ -0.54
KPNA3-201ENST00000261667 IGBP1P78318 339 aa11.71□□□□□ -0.54
KPNA3-201ENST00000261667 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.54
KPNA3-201ENST00000261667 NUDCD3Q8IVD9 361 aa11.71□□□□□ -0.54
KPNA3-201ENST00000261667 MEIS3Q99687 375 aa11.71□□□□□ -0.54
KPNA3-201ENST00000261667 RMND1Q9NWS8 449 aa11.71□□□□□ -0.54
KPNA3-201ENST00000261667 PALD1Q9ULE6 856 aa11.71□□□□□ -0.54
KPNA3-201ENST00000261667 ROBO2Q9HCK4 1378 aa11.71□□□□□ -0.54
KPNA3-201ENST00000261667 SLC7A5Q01650 507 aa11.7□□□□□ -0.54
KPNA3-201ENST00000261667 ZNF449Q6P9G9 518 aa11.7□□□□□ -0.54
KPNA3-201ENST00000261667 APLFQ8IW19 511 aaPredicted RBP11.7□□□□□ -0.54
KPNA3-201ENST00000261667 PHAXQ9H814 394 aaKnown RBP11.7□□□□□ -0.54
KPNA3-201ENST00000261667 L2HGDHQ9H9P8 463 aa11.7□□□□□ -0.54
KPNA3-201ENST00000261667 CCDC169A6NNP5 214 aa11.7□□□□□ -0.54
KPNA3-201ENST00000261667 PSMA7O14818 248 aa11.7□□□□□ -0.54
KPNA3-201ENST00000261667 HEXIM1O94992 359 aaKnown RBP11.7□□□□□ -0.54
KPNA3-201ENST00000261667 GSPT1P15170 499 aaKnown RBP11.7□□□□□ -0.54
KPNA3-201ENST00000261667 CDC25CP30307 473 aa11.7□□□□□ -0.54
KPNA3-201ENST00000261667 ESRRGP62508 458 aa11.7□□□□□ -0.54
KPNA3-201ENST00000261667 PLCB4Q15147 1175 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms