RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 SPEF2Q9C093 1822 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 STRCQ7RTU9 1775 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 RPN1P04843 607 aaKnown RBP17.85■□□□□ 0.45
LMNB1-201ENST00000261366 EVX2Q03828 476 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 WDR59Q6PJI9 974 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 RWDD2AQ9UIY3 292 aa17.85■□□□□ 0.45
LMNB1-201ENST00000261366 AGPSO00116 658 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 IL17AQ16552 155 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 CTCFLQ8NI51 663 aaPredicted RBP17.84■□□□□ 0.45
LMNB1-201ENST00000261366 RASGRP4Q8TDF6 673 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 PIGBQ92521 554 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 HAUS4Q9H6D7 363 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 ABCC12Q96J65 1359 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 NMT2O60551 498 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 NLRP10Q86W26 655 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 IRF2BP1Q8IU81 584 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 BCAS4Q8TDM0 211 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 PHF20Q9BVI0 1012 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 FBXO3Q9UK99 471 aa17.84■□□□□ 0.45
LMNB1-201ENST00000261366 EXOC5O00471 708 aa17.83■□□□□ 0.45
LMNB1-201ENST00000261366 SEMA3EO15041 775 aa17.83■□□□□ 0.45
LMNB1-201ENST00000261366 TUBB4BP68371 445 aa17.83■□□□□ 0.45
LMNB1-201ENST00000261366 IFIT1BQ5T764 474 aaKnown RBP17.83■□□□□ 0.45
LMNB1-201ENST00000261366 FBXW10Q5XX13 1052 aa17.83■□□□□ 0.45
LMNB1-201ENST00000261366 TADA2BQ86TJ2 420 aa17.83■□□□□ 0.45
LMNB1-201ENST00000261366 MB21D1Q8N884 522 aa17.83■□□□□ 0.45
LMNB1-201ENST00000261366 ENAHQ8N8S7 591 aaPredicted RBP17.83■□□□□ 0.45
LMNB1-201ENST00000261366 STAG1Q8WVM7 1258 aa17.83■□□□□ 0.45
LMNB1-201ENST00000261366 FERMT2Q96AC1 680 aa17.83■□□□□ 0.45
LMNB1-201ENST00000261366 A0A0G2JS52 829 aa17.83■□□□□ 0.44
LMNB1-201ENST00000261366 PSMD14O00487 310 aa17.83■□□□□ 0.44
LMNB1-201ENST00000261366 IPO7O95373 1038 aaKnown RBP17.83■□□□□ 0.44
LMNB1-201ENST00000261366 PLEKP08567 350 aaPredicted RBP17.83■□□□□ 0.44
LMNB1-201ENST00000261366 UQCRFS1P1P0C7P4 283 aa17.83■□□□□ 0.44
LMNB1-201ENST00000261366 NLRP5P59047 1200 aa17.83■□□□□ 0.44
LMNB1-201ENST00000261366 KCTD16Q68DU8 428 aa17.83■□□□□ 0.44
LMNB1-201ENST00000261366 ADGRA1Q86SQ6 560 aa17.83■□□□□ 0.44
LMNB1-201ENST00000261366 BRMS1Q9HCU9 246 aa17.83■□□□□ 0.44
LMNB1-201ENST00000261366 DMGDHQ9UI17 866 aaKnown RBP17.83■□□□□ 0.44
LMNB1-201ENST00000261366 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
LMNB1-201ENST00000261366 CYP7A1P22680 504 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 STAT6P42226 847 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 GNGT1P63211 74 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 SPAG1Q07617 926 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 PUM3Q15397 648 aaKnown RBP17.82■□□□□ 0.44
LMNB1-201ENST00000261366 ALX1Q15699 326 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 RNF26Q9BY78 433 aaPredicted RBP17.82■□□□□ 0.44
LMNB1-201ENST00000261366 DEF6Q9H4E7 631 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 NKRFO15226 690 aaKnown RBP eCLIP17.82■□□□□ 0.44
LMNB1-201ENST00000261366 KRT86O43790 486 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 ZPR1O75312 459 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 FECHP22830 423 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 ARID4AP29374 1257 aaPredicted RBP17.82■□□□□ 0.44
LMNB1-201ENST00000261366 AARSP49588 968 aaKnown RBP eCLIP17.82■□□□□ 0.443e-6■■□□□ 13.8
LMNB1-201ENST00000261366 IRAK1P51617 712 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 KCTD19Q17RG1 926 aaPredicted RBP17.82■□□□□ 0.44
LMNB1-201ENST00000261366 CCDC96Q2M329 555 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 PDXDC2PQ6P474 469 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 ANKRD13CQ8N6S4 541 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 LPIN2Q92539 896 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 AKAP11Q9UKA4 1901 aa17.82■□□□□ 0.44
LMNB1-201ENST00000261366 LOC102724159A0A0B4J2E5 919 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 ATP1A2P50993 1020 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 PWP2Q15269 919 aaKnown RBP17.81■□□□□ 0.44
LMNB1-201ENST00000261366 ZNF658Q5TYW1 1059 aaPredicted RBP17.81■□□□□ 0.44
LMNB1-201ENST00000261366 CCNI2Q6ZMN8 369 aaPredicted RBP17.81■□□□□ 0.44
LMNB1-201ENST00000261366 KAT2BQ92831 832 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 LRRC1Q9BTT6 524 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 MYH7P12883 1935 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 LRRC10BA6NIK2 292 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 TUBBP07437 444 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 CATIPQ7Z7H3 387 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 NHEJ1Q9H9Q4 299 aaPredicted RBP17.81■□□□□ 0.44
LMNB1-201ENST00000261366 LRWD1Q9UFC0 647 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 FAM169AQ9Y6X4 670 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 GTPBP6O43824 516 aaPredicted RBP17.81■□□□□ 0.44
LMNB1-201ENST00000261366 ERLIN2O94905 339 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 TRIM14Q14142 442 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 EFCAB13Q8IY85 973 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 TMTC2Q8N394 836 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 SH2D3CQ8N5H7 860 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 ESR2Q92731 530 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 VIPAS39Q9H9C1 493 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 MLXIPQ9HAP2 919 aa17.81■□□□□ 0.44
LMNB1-201ENST00000261366 MAGEC2Q9UBF1 373 aaPredicted RBP17.81■□□□□ 0.44
LMNB1-201ENST00000261366 DDX60Q8IY21 1712 aaKnown RBP17.81■□□□□ 0.44
LMNB1-201ENST00000261366 WTIPA6NIX2 430 aaPredicted RBP17.8■□□□□ 0.44
LMNB1-201ENST00000261366 EBAG9O00559 213 aa17.8■□□□□ 0.44
LMNB1-201ENST00000261366 MSL3Q8N5Y2 521 aaKnown RBP17.8■□□□□ 0.44
LMNB1-201ENST00000261366 ATRNO75882 1429 aa17.8■□□□□ 0.44
LMNB1-201ENST00000261366 ZEB2O60315 1214 aa17.8■□□□□ 0.44
LMNB1-201ENST00000261366 SLC5A1P13866 664 aa17.8■□□□□ 0.44
LMNB1-201ENST00000261366 ATP2C1P98194 919 aaPredicted RBP17.8■□□□□ 0.44
LMNB1-201ENST00000261366 FAM47AQ5JRC9 791 aa17.8■□□□□ 0.44
LMNB1-201ENST00000261366 CAPS2Q9BXY5 557 aa17.8■□□□□ 0.44
LMNB1-201ENST00000261366 ZNHIT6Q9NWK9 470 aaKnown RBP17.8■□□□□ 0.44
LMNB1-201ENST00000261366 DYNLL1P63167 89 aaKnown RBP17.79■□□□□ 0.44
LMNB1-201ENST00000261366 CKAP4Q07065 602 aaKnown RBP17.79■□□□□ 0.44
LMNB1-201ENST00000261366 TBC1D8BQ0IIM8 1120 aa17.79■□□□□ 0.44
LMNB1-201ENST00000261366 GIGYF2Q6Y7W6 1299 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms