RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 DIS3L2Q8IYB7 885 aaKnown RBP20.48■□□□□ 0.87
CCDC115-201ENST00000259229 OXER1Q8TDS5 423 aa20.48■□□□□ 0.87
CCDC115-201ENST00000259229 FEZ1Q99689 392 aa20.48■□□□□ 0.87
CCDC115-201ENST00000259229 CLEC11AQ9Y240 323 aa20.48■□□□□ 0.87
CCDC115-201ENST00000259229 CNPY2Q9Y2B0 182 aa20.48■□□□□ 0.87
CCDC115-201ENST00000259229 RLFQ13129 1914 aa20.48■□□□□ 0.87
CCDC115-201ENST00000259229 BTBD18B2RXH4 712 aa20.47■□□□□ 0.87
CCDC115-201ENST00000259229 TMEM232C9JQI7 657 aa20.47■□□□□ 0.87
CCDC115-201ENST00000259229 TRAF5O00463 557 aa20.47■□□□□ 0.87
CCDC115-201ENST00000259229 LDHDQ86WU2 507 aa20.47■□□□□ 0.87
CCDC115-201ENST00000259229 ZNF280CQ8ND82 737 aa20.47■□□□□ 0.87
CCDC115-201ENST00000259229 TNFRSF25Q93038 417 aa20.47■□□□□ 0.87
CCDC115-201ENST00000259229 EMILIN3Q9NT22 766 aa20.47■□□□□ 0.87
CCDC115-201ENST00000259229 XBP1P17861 261 aa20.46■□□□□ 0.87
CCDC115-201ENST00000259229 SPP2Q13103 211 aa20.46■□□□□ 0.87
CCDC115-201ENST00000259229 HEATR3Q7Z4Q2 680 aa20.46■□□□□ 0.87
CCDC115-201ENST00000259229 BRAPQ7Z569 592 aa20.46■□□□□ 0.87
CCDC115-201ENST00000259229 LPAR1Q92633 364 aa20.46■□□□□ 0.87
CCDC115-201ENST00000259229 AFG3L2Q9Y4W6 797 aa20.46■□□□□ 0.87
CCDC115-201ENST00000259229 ZHX2Q9Y6X8 837 aa20.46■□□□□ 0.87
CCDC115-201ENST00000259229 PNMA6FA0A0J9YX94 578 aa20.45■□□□□ 0.87
CCDC115-201ENST00000259229 ZBTB5O15062 677 aa20.45■□□□□ 0.87
CCDC115-201ENST00000259229 PLA2G6O60733 806 aa20.45■□□□□ 0.87
CCDC115-201ENST00000259229 NF2P35240 595 aa20.45■□□□□ 0.87
CCDC115-201ENST00000259229 IREB2P48200 963 aaKnown RBP20.45■□□□□ 0.87
CCDC115-201ENST00000259229 BACE1P56817 501 aa20.45■□□□□ 0.87
CCDC115-201ENST00000259229 NR5A1Q13285 461 aa20.45■□□□□ 0.87
CCDC115-201ENST00000259229 SYDE2Q5VT97 1194 aa20.45■□□□□ 0.87
CCDC115-201ENST00000259229 TMEM87AQ8NBN3 555 aa20.45■□□□□ 0.87
CCDC115-201ENST00000259229 FOXP1Q9H334 677 aaPredicted RBP20.45■□□□□ 0.87
CCDC115-201ENST00000259229 AS3MTQ9HBK9 375 aa20.45■□□□□ 0.87
CCDC115-201ENST00000259229 GDPD2Q9HCC8 539 aa20.45■□□□□ 0.87
CCDC115-201ENST00000259229 SEC63Q9UGP8 760 aaKnown RBP20.45■□□□□ 0.87
CCDC115-201ENST00000259229 ISY1Q9ULR0 285 aaKnown RBP20.45■□□□□ 0.87
CCDC115-201ENST00000259229 M0R2N6 131 aa20.45■□□□□ 0.86
CCDC115-201ENST00000259229 WDR46O15213 610 aaKnown RBP20.45■□□□□ 0.86
CCDC115-201ENST00000259229 STAT2P52630 851 aa20.45■□□□□ 0.86
CCDC115-201ENST00000259229 CDC37Q16543 378 aaPredicted RBP20.45■□□□□ 0.86
CCDC115-201ENST00000259229 QRICH1Q2TAL8 776 aa20.45■□□□□ 0.86
CCDC115-201ENST00000259229 MYSM1Q5VVJ2 828 aa20.45■□□□□ 0.86
CCDC115-201ENST00000259229 FAM177A1Q8N128 213 aaPredicted RBP20.45■□□□□ 0.86
CCDC115-201ENST00000259229 ZNF526Q8TF50 670 aaPredicted RBP20.45■□□□□ 0.86
CCDC115-201ENST00000259229 CNKSR2Q8WXI2 1034 aa20.45■□□□□ 0.86
CCDC115-201ENST00000259229 CLMNQ96JQ2 1002 aa20.45■□□□□ 0.86
CCDC115-201ENST00000259229 C12orf42Q96LP6 360 aa20.45■□□□□ 0.86
CCDC115-201ENST00000259229 PRR12Q9ULL5 1215 aa20.45■□□□□ 0.86
CCDC115-201ENST00000259229 DDX11L8A8MPP1 907 aa20.44■□□□□ 0.86
CCDC115-201ENST00000259229 hCG_1984214I3L0E3 225 aa20.44■□□□□ 0.86
CCDC115-201ENST00000259229 VCAM1P19320 739 aa20.44■□□□□ 0.86
CCDC115-201ENST00000259229 YY1P25490 414 aa20.44■□□□□ 0.86
CCDC115-201ENST00000259229 NOSTRINQ8IVI9 506 aa20.44■□□□□ 0.86
CCDC115-201ENST00000259229 ZNF713Q8N859 430 aaPredicted RBP20.44■□□□□ 0.86
CCDC115-201ENST00000259229 DAGLBQ8NCG7 672 aa20.44■□□□□ 0.86
CCDC115-201ENST00000259229 FTOQ9C0B1 505 aaKnown RBP eCLIP20.44■□□□□ 0.86
CCDC115-201ENST00000259229 ZMYND12Q9H0C1 365 aa20.44■□□□□ 0.86
CCDC115-201ENST00000259229 LMBRD1Q9NUN5 540 aa20.44■□□□□ 0.86
CCDC115-201ENST00000259229 FBXO28Q9NVF7 368 aa20.44■□□□□ 0.86
CCDC115-201ENST00000259229 TRIM75PA6NK02 468 aa20.43■□□□□ 0.86
CCDC115-201ENST00000259229 KRT2P35908 639 aa20.43■□□□□ 0.86
CCDC115-201ENST00000259229 KRT85P78386 507 aa20.43■□□□□ 0.86
CCDC115-201ENST00000259229 SAFBQ15424 915 aaKnown RBP eCLIP20.43■□□□□ 0.86
CCDC115-201ENST00000259229 EARS2Q5JPH6 523 aaKnown RBP20.43■□□□□ 0.86
CCDC115-201ENST00000259229 ANKRD13AQ8IZ07 590 aa20.43■□□□□ 0.86
CCDC115-201ENST00000259229 USP28Q96RU2 1077 aa20.43■□□□□ 0.86
CCDC115-201ENST00000259229 ESYT2A0FGR8 921 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 USP14P54578 494 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 NLRP5P59047 1200 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 SNAP25P60880 206 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 NOM1Q5C9Z4 860 aaKnown RBP20.42■□□□□ 0.86
CCDC115-201ENST00000259229 LDLRAD1Q5T700 205 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 CCDC148Q8NFR7 591 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 COA7Q96BR5 231 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 TFIP11Q9UBB9 837 aaKnown RBP20.42■□□□□ 0.86
CCDC115-201ENST00000259229 CSADQ9Y600 493 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 FAM205CA6NFA0 338 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 FIBPO43427 364 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 HMGCS2P54868 508 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 NAPAP54920 295 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 NBR1Q14596 966 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 SH3D19Q5HYK7 790 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 FAM160B2Q86V87 743 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 RANBP17Q9H2T7 1088 aaKnown RBP20.42■□□□□ 0.86
CCDC115-201ENST00000259229 ELP3Q9H9T3 547 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 FEM1BQ9UK73 627 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 PCDHA4Q9UN74 947 aa20.42■□□□□ 0.86
CCDC115-201ENST00000259229 TRPM7Q96QT4 1865 aa20.41■□□□□ 0.86
CCDC115-201ENST00000259229 SMCHD1A6NHR9 2005 aa20.41■□□□□ 0.86
CCDC115-201ENST00000259229 SPDYE5A6NIY4 337 aa20.41■□□□□ 0.86
CCDC115-201ENST00000259229 CALML3P27482 149 aa20.41■□□□□ 0.86
CCDC115-201ENST00000259229 IKQ13123 557 aaPredicted RBP20.41■□□□□ 0.86
CCDC115-201ENST00000259229 PPP1R18Q6NYC8 613 aa20.41■□□□□ 0.86
CCDC115-201ENST00000259229 C19orf81C9J6K1 198 aa20.4■□□□□ 0.86
CCDC115-201ENST00000259229 NCLP19338 710 aaKnown RBP20.4■□□□□ 0.86
CCDC115-201ENST00000259229 TOB1P50616 345 aaPredicted RBP20.4■□□□□ 0.86
CCDC115-201ENST00000259229 ATL3Q6DD88 541 aa20.4■□□□□ 0.86
CCDC115-201ENST00000259229 BLIDQ8IZY5 108 aa20.4■□□□□ 0.86
CCDC115-201ENST00000259229 CHURC1Q8WUH1 139 aa20.4■□□□□ 0.86
CCDC115-201ENST00000259229 RPAP3Q9H6T3 665 aaPredicted RBP20.4■□□□□ 0.86
CCDC115-201ENST00000259229 COL11A1P12107 1806 aaPredicted RBP20.4■□□□□ 0.86
CCDC115-201ENST00000259229 A0A0G2JMZ2 1700 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms