RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 RBM28Q9NW13 759 aaKnown RBP26.58■■□□□ 1.85
APOE-201ENST00000252486 MAD2L2Q9UI95 211 aa26.58■■□□□ 1.85
APOE-201ENST00000252486 NAP1L2Q9ULW6 460 aaPredicted RBP26.58■■□□□ 1.85
APOE-201ENST00000252486 ADAMTS5Q9UNA0 930 aa26.58■■□□□ 1.85
APOE-201ENST00000252486 RABGAP1Q9Y3P9 1069 aa26.58■■□□□ 1.85
APOE-201ENST00000252486 RLFQ13129 1914 aa26.57■■□□□ 1.84
APOE-201ENST00000252486 GOLGA8BA8MQT2 603 aa26.57■■□□□ 1.84
APOE-201ENST00000252486 KLRF2D3W0D1 207 aa26.57■■□□□ 1.84
APOE-201ENST00000252486 TBC1D8O95759 1140 aa26.57■■□□□ 1.84
APOE-201ENST00000252486 SYDE2Q5VT97 1194 aa26.57■■□□□ 1.84
APOE-201ENST00000252486 C17orf99Q6UX52 265 aa26.57■■□□□ 1.84
APOE-201ENST00000252486 ATG4CQ96DT6 458 aa26.57■■□□□ 1.84
APOE-201ENST00000252486 MYL10Q9BUA6 226 aa26.57■■□□□ 1.84
APOE-201ENST00000252486 CTDP1Q9Y5B0 961 aaPredicted RBP26.57■■□□□ 1.84
APOE-201ENST00000252486 CCDC196A0A1B0GTZ2 297 aa26.56■■□□□ 1.84
APOE-201ENST00000252486 ST18O60284 1047 aa26.56■■□□□ 1.84
APOE-201ENST00000252486 ZBED4O75132 1171 aa26.56■■□□□ 1.84
APOE-201ENST00000252486 GOLGA8HP0CJ92 632 aa26.56■■□□□ 1.84
APOE-201ENST00000252486 AK2P54819 239 aa26.56■■□□□ 1.84
APOE-201ENST00000252486 TTBK2Q6IQ55 1244 aa26.56■■□□□ 1.84
APOE-201ENST00000252486 SAMD1Q6SPF0 538 aaPredicted RBP26.56■■□□□ 1.84
APOE-201ENST00000252486 MORF4L1Q9UBU8 362 aa26.56■■□□□ 1.84
APOE-201ENST00000252486 PRR12Q9ULL5 1215 aa26.56■■□□□ 1.84
APOE-201ENST00000252486 GOLGA8AA7E2F4 631 aa26.55■■□□□ 1.84
APOE-201ENST00000252486 VWA5AO00534 786 aa26.55■■□□□ 1.84
APOE-201ENST00000252486 SMARCA1P28370 1054 aa26.55■■□□□ 1.84
APOE-201ENST00000252486 METAP2P50579 478 aaKnown RBP eCLIP26.55■■□□□ 1.84
APOE-201ENST00000252486 RTN1Q16799 776 aa26.55■■□□□ 1.84
APOE-201ENST00000252486 FAM110CQ1W6H9 321 aa26.55■■□□□ 1.84
APOE-201ENST00000252486 NID2Q14112 1375 aa26.55■■□□□ 1.84
APOE-201ENST00000252486 BCRP11274 1271 aa26.54■■□□□ 1.84
APOE-201ENST00000252486 STAG2Q8N3U4 1231 aa26.54■■□□□ 1.84
APOE-201ENST00000252486 GPRC5AQ8NFJ5 357 aa26.54■■□□□ 1.84
APOE-201ENST00000252486 SLC38A10Q9HBR0 1119 aa26.54■■□□□ 1.84
APOE-201ENST00000252486 RBPJLQ9UBG7 517 aa26.54■■□□□ 1.84
APOE-201ENST00000252486 CPA4Q9UI42 421 aa26.54■■□□□ 1.84
APOE-201ENST00000252486 PNMA2Q9UL42 364 aa26.54■■□□□ 1.84
APOE-201ENST00000252486 A0A0G2JMZ2 1700 aa26.53■■□□□ 1.84
APOE-201ENST00000252486 PDIA3P30101 505 aaKnown RBP26.53■■□□□ 1.84
APOE-201ENST00000252486 SLC16A2P36021 539 aa26.53■■□□□ 1.84
APOE-201ENST00000252486 ANKRD13CQ8N6S4 541 aa26.53■■□□□ 1.84
APOE-201ENST00000252486 PAGR1Q9BTK6 254 aa26.53■■□□□ 1.84
APOE-201ENST00000252486 UBA5Q9GZZ9 404 aa26.53■■□□□ 1.84
APOE-201ENST00000252486 GPR25O00155 361 aa26.52■■□□□ 1.84
APOE-201ENST00000252486 HSPA1AP0DMV8 641 aaKnown RBP26.52■■□□□ 1.84
APOE-201ENST00000252486 HSPA1BP0DMV9 641 aaKnown RBP26.52■■□□□ 1.84
APOE-201ENST00000252486 RXRAP19793 462 aa26.52■■□□□ 1.84
APOE-201ENST00000252486 OAZ1P54368 228 aa26.52■■□□□ 1.84
APOE-201ENST00000252486 CCNA1P78396 465 aa26.52■■□□□ 1.84
APOE-201ENST00000252486 SPZ1Q9BXG8 430 aa26.52■■□□□ 1.84
APOE-201ENST00000252486 RANBP17Q9H2T7 1088 aaKnown RBP26.52■■□□□ 1.84
APOE-201ENST00000252486 R3HDMLQ9H3Y0 253 aa26.52■■□□□ 1.84
APOE-201ENST00000252486 CEP350Q5VT06 3117 aa26.52■■□□□ 1.84
APOE-201ENST00000252486 ATP2A1O14983 1001 aa26.51■■□□□ 1.83
APOE-201ENST00000252486 ERVK-9P63128 1117 aa26.51■■□□□ 1.83
APOE-201ENST00000252486 ERVK-24P63145 666 aa26.51■■□□□ 1.83
APOE-201ENST00000252486 RAB11FIP4Q86YS3 637 aa26.51■■□□□ 1.83
APOE-201ENST00000252486 CCDC144CPQ8IYA2 1237 aa26.51■■□□□ 1.83
APOE-201ENST00000252486 ADGRF4Q8IZF3 695 aa26.51■■□□□ 1.83
APOE-201ENST00000252486 REPS2Q8NFH8 660 aa26.51■■□□□ 1.83
APOE-201ENST00000252486 HPS5Q9UPZ3 1129 aa26.51■■□□□ 1.83
APOE-201ENST00000252486 DHX16O60231 1041 aaKnown RBP26.5■■□□□ 1.83
APOE-201ENST00000252486 COPB2P35606 906 aa26.5■■□□□ 1.83
APOE-201ENST00000252486 MCM2P49736 904 aa26.5■■□□□ 1.83
APOE-201ENST00000252486 SP3Q02447 781 aa26.5■■□□□ 1.83
APOE-201ENST00000252486 TMTC3Q6ZXV5 915 aa26.5■■□□□ 1.83
APOE-201ENST00000252486 RIOX1Q9H6W3 641 aa26.5■■□□□ 1.83
APOE-201ENST00000252486 TXNRD2Q9NNW7 524 aa26.5■■□□□ 1.83
APOE-201ENST00000252486 BTBD7Q9P203 1132 aa26.5■■□□□ 1.83
APOE-201ENST00000252486 LIMCH1Q9UPQ0 1083 aa26.5■■□□□ 1.83
APOE-201ENST00000252486 CNMDO75829 334 aa26.49■■□□□ 1.83
APOE-201ENST00000252486 CTCFP49711 727 aaPredicted RBP26.49■■□□□ 1.83
APOE-201ENST00000252486 TMEM132BQ14DG7 1078 aa26.49■■□□□ 1.83
APOE-201ENST00000252486 POTEEQ6S8J3 1075 aa26.49■■□□□ 1.83
APOE-201ENST00000252486 ZSCAN31Q96LW9 406 aaPredicted RBP26.49■■□□□ 1.83
APOE-201ENST00000252486 TEX13BQ9BXU2 312 aa26.49■■□□□ 1.83
APOE-201ENST00000252486 SPATC1LQ9H0A9 340 aa26.49■■□□□ 1.83
APOE-201ENST00000252486 SLKQ9H2G2 1235 aaPredicted RBP26.49■■□□□ 1.83
APOE-201ENST00000252486 ZNF214Q9UL59 606 aaPredicted RBP26.49■■□□□ 1.83
APOE-201ENST00000252486 TPCN1Q9ULQ1 816 aa26.49■■□□□ 1.83
APOE-201ENST00000252486 FKTNO75072 461 aa26.48■■□□□ 1.83
APOE-201ENST00000252486 SLC25A27O95847 323 aa26.48■■□□□ 1.83
APOE-201ENST00000252486 TRAF1Q13077 416 aa26.48■■□□□ 1.83
APOE-201ENST00000252486 CPLX2Q6PUV4 134 aaKnown RBP26.48■■□□□ 1.83
APOE-201ENST00000252486 LARP6Q9BRS8 491 aaKnown RBP26.48■■□□□ 1.83
APOE-201ENST00000252486 JMJD4Q9H9V9 463 aa26.48■■□□□ 1.83
APOE-201ENST00000252486 FOXN1O15353 648 aa26.47■■□□□ 1.83
APOE-201ENST00000252486 PFKFB2O60825 505 aa26.47■■□□□ 1.83
APOE-201ENST00000252486 STAT3P40763 770 aa26.47■■□□□ 1.83
APOE-201ENST00000252486 PLS1Q14651 629 aa26.47■■□□□ 1.83
APOE-201ENST00000252486 KIF22Q14807 665 aa26.47■■□□□ 1.83
APOE-201ENST00000252486 ARHGEF6Q15052 776 aa26.47■■□□□ 1.83
APOE-201ENST00000252486 CCAR1Q8IX12 1150 aaKnown RBP26.47■■□□□ 1.83
APOE-201ENST00000252486 SRBD1Q8N5C6 995 aaKnown RBP26.47■■□□□ 1.83
APOE-201ENST00000252486 SHCBP1Q8NEM2 672 aa26.47■■□□□ 1.83
APOE-201ENST00000252486 MTMR8Q96EF0 704 aa26.47■■□□□ 1.83
APOE-201ENST00000252486 ERO1AQ96HE7 468 aa26.47■■□□□ 1.83
APOE-201ENST00000252486 CPVLQ9H3G5 476 aa26.47■■□□□ 1.83
APOE-201ENST00000252486 VAT1LQ9HCJ6 419 aa26.47■■□□□ 1.83
APOE-201ENST00000252486 FAM217BQ9NTX9 383 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms