RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 AGTPBP1Q9UPW5 1226 aa23.42■■□□□ 1.34
SNRPA-201ENST00000243563 ADGRF4Q8IZF3 695 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 CCDC102AQ96A19 550 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 JMJD4Q9H9V9 463 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 VAT1LQ9HCJ6 419 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 PRR12Q9ULL5 1215 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 THSD7BQ9C0I4 1608 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 PTPDC1A2A3K4 754 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 TESPA1A2RU30 521 aaPredicted RBP23.41■■□□□ 1.34
SNRPA-201ENST00000243563 IGF2BP3O00425 579 aaKnown RBP eCLIP23.41■■□□□ 1.34
SNRPA-201ENST00000243563 FLOT1O75955 427 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 FDPSP14324 419 aaKnown RBP23.41■■□□□ 1.34
SNRPA-201ENST00000243563 IFNAR1P17181 557 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 TAL1P17542 331 aaPredicted RBP23.41■■□□□ 1.34
SNRPA-201ENST00000243563 STAT2P52630 851 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 C1QTNF8P60827 252 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 SYDE2Q5VT97 1194 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 FASTKD5Q7L8L6 764 aaKnown RBP23.41■■□□□ 1.34
SNRPA-201ENST00000243563 KIFC2Q96AC6 838 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 RIOX1Q9H6W3 641 aa23.41■■□□□ 1.34
SNRPA-201ENST00000243563 USP17L15C9J2P7 530 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 USP17L13C9JLJ4 530 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 USP17L11C9JVI0 530 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 USP17L18D6R9N7 530 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 USP17L22D6RA61 530 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 USP17L17D6RBQ6 530 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 USP17L19D6RCP7 530 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 USP17L20D6RJB6 530 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 PEX10O60683 326 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 USP17L24Q0WX57 530 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 IKQ13123 557 aaPredicted RBP23.4■■□□□ 1.34
SNRPA-201ENST00000243563 SMARCC2Q8TAQ2 1214 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 DDX11Q96FC9 970 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 SPZ1Q9BXG8 430 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 FEM1BQ9UK73 627 aa23.4■■□□□ 1.34
SNRPA-201ENST00000243563 CCDC196A0A1B0GTZ2 297 aa23.39■■□□□ 1.33
SNRPA-201ENST00000243563 CPLX1O14810 134 aa23.39■■□□□ 1.33
SNRPA-201ENST00000243563 HOXA7P31268 230 aaPredicted RBP23.39■■□□□ 1.33
SNRPA-201ENST00000243563 KIF23Q02241 960 aaPredicted RBP23.39■■□□□ 1.33
SNRPA-201ENST00000243563 PPP2R5BQ15173 497 aa23.39■■□□□ 1.33
SNRPA-201ENST00000243563 ATG4CQ96DT6 458 aa23.39■■□□□ 1.33
SNRPA-201ENST00000243563 AIFM3Q96NN9 605 aa23.39■■□□□ 1.33
SNRPA-201ENST00000243563 PIGSQ96S52 555 aa23.39■■□□□ 1.33
SNRPA-201ENST00000243563 SLF1Q9BQI6 1058 aa23.39■■□□□ 1.33
SNRPA-201ENST00000243563 SLC26A6Q9BXS9 759 aa23.39■■□□□ 1.33
SNRPA-201ENST00000243563 ASCC2Q9H1I8 757 aaPredicted RBP23.39■■□□□ 1.33
SNRPA-201ENST00000243563 PLA2G6O60733 806 aa23.38■■□□□ 1.33
SNRPA-201ENST00000243563 GNAQP50148 359 aa23.38■■□□□ 1.33
SNRPA-201ENST00000243563 MTMR8Q96EF0 704 aa23.38■■□□□ 1.33
SNRPA-201ENST00000243563 PPP1R9AQ9ULJ8 1098 aa23.38■■□□□ 1.33
SNRPA-201ENST00000243563 MANSC4A6NHS7 340 aaPredicted RBP23.37■■□□□ 1.33
SNRPA-201ENST00000243563 SPDYE16A6NNV3 312 aaPredicted RBP23.37■■□□□ 1.33
SNRPA-201ENST00000243563 PPP1R11O60927 126 aaPredicted RBP23.37■■□□□ 1.33
SNRPA-201ENST00000243563 FMNL1O95466 1100 aaPredicted RBP23.37■■□□□ 1.33
SNRPA-201ENST00000243563 VEGFBP49765 207 aa23.37■■□□□ 1.33
SNRPA-201ENST00000243563 BECN1Q14457 450 aa23.37■■□□□ 1.33
SNRPA-201ENST00000243563 PKN1Q16512 942 aa23.37■■□□□ 1.33
SNRPA-201ENST00000243563 HOMER1Q86YM7 354 aa23.37■■□□□ 1.33
SNRPA-201ENST00000243563 SHISA4Q96DD7 197 aa23.37■■□□□ 1.33
SNRPA-201ENST00000243563 P2RX7Q99572 595 aaKnown RBP23.37■■□□□ 1.33
SNRPA-201ENST00000243563 V9GY48 417 aaPredicted RBP23.37■■□□□ 1.33
SNRPA-201ENST00000243563 PDHXO00330 501 aa23.37■■□□□ 1.33
SNRPA-201ENST00000243563 DHX16O60231 1041 aaKnown RBP23.37■■□□□ 1.33
SNRPA-201ENST00000243563 CYP2C8P10632 490 aa23.37■■□□□ 1.33
SNRPA-201ENST00000243563 DSG3P32926 999 aa23.37■■□□□ 1.33
SNRPA-201ENST00000243563 ANKRD23Q86SG2 305 aa23.37■■□□□ 1.33
SNRPA-201ENST00000243563 FAM160B2Q86V87 743 aa23.37■■□□□ 1.33
SNRPA-201ENST00000243563 LZTS2Q9BRK4 669 aa23.37■■□□□ 1.33
SNRPA-201ENST00000243563 WDR33Q9C0J8 1336 aaKnown RBP23.36■■□□□ 1.33
SNRPA-201ENST00000243563 HSPA6P17066 643 aa23.36■■□□□ 1.33
SNRPA-201ENST00000243563 CHURC1Q8WUH1 139 aa23.36■■□□□ 1.33
SNRPA-201ENST00000243563 LLPHQ9BRT6 129 aaKnown RBP23.36■■□□□ 1.33
SNRPA-201ENST00000243563 PRPF3O43395 683 aaKnown RBP23.35■■□□□ 1.33
SNRPA-201ENST00000243563 SMARCA1P28370 1054 aa23.35■■□□□ 1.33
SNRPA-201ENST00000243563 COG2Q14746 738 aa23.35■■□□□ 1.33
SNRPA-201ENST00000243563 CDC37Q16543 378 aaPredicted RBP23.35■■□□□ 1.33
SNRPA-201ENST00000243563 QRICH1Q2TAL8 776 aa23.35■■□□□ 1.33
SNRPA-201ENST00000243563 PRPF38AQ8NAV1 312 aaKnown RBP23.35■■□□□ 1.33
SNRPA-201ENST00000243563 REPS2Q8NFH8 660 aa23.35■■□□□ 1.33
SNRPA-201ENST00000243563 RANBP17Q9H2T7 1088 aaKnown RBP23.35■■□□□ 1.33
SNRPA-201ENST00000243563 GJB4Q9NTQ9 266 aa23.35■■□□□ 1.33
SNRPA-201ENST00000243563 ADAMTS5Q9UNA0 930 aa23.35■■□□□ 1.33
SNRPA-201ENST00000243563 ZNF536O15090 1300 aa23.34■■□□□ 1.33
SNRPA-201ENST00000243563 GJB2P29033 226 aa23.34■■□□□ 1.33
SNRPA-201ENST00000243563 SSRP1Q08945 709 aaKnown RBP23.34■■□□□ 1.33
SNRPA-201ENST00000243563 CCDC174Q6PII3 467 aa23.34■■□□□ 1.33
SNRPA-201ENST00000243563 IFNL1Q8IU54 200 aa23.34■■□□□ 1.33
SNRPA-201ENST00000243563 GPKOWQ92917 476 aaPredicted RBP eCLIP23.34■■□□□ 1.33
SNRPA-201ENST00000243563 RNF26Q9BY78 433 aaPredicted RBP23.34■■□□□ 1.33
SNRPA-201ENST00000243563 ORC3Q9UBD5 711 aaPredicted RBP23.34■■□□□ 1.33
SNRPA-201ENST00000243563 STK36Q9NRP7 1315 aa23.34■■□□□ 1.33
SNRPA-201ENST00000243563 VWA5AO00534 786 aa23.33■■□□□ 1.33
SNRPA-201ENST00000243563 FOSBP53539 338 aa23.33■■□□□ 1.33
SNRPA-201ENST00000243563 HERVK_113P62684 666 aa23.33■■□□□ 1.33
SNRPA-201ENST00000243563 IRX3P78415 501 aaPredicted RBP23.33■■□□□ 1.33
SNRPA-201ENST00000243563 NOGQ13253 232 aa23.33■■□□□ 1.33
SNRPA-201ENST00000243563 INTS4Q96HW7 963 aaKnown RBP23.33■■□□□ 1.33
SNRPA-201ENST00000243563 CNMDO75829 334 aa23.33■■□□□ 1.32
SNRPA-201ENST00000243563 TM4SF4P48230 202 aa23.33■■□□□ 1.32
SNRPA-201ENST00000243563 TYW1BQ6NUM6 668 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms