RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SYNE4Q8N205 404 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 CEP120Q8N960 986 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 PIM2Q9P1W9 311 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 GINS2Q9Y248 185 aa12.22□□□□□ -0.45
COPA-201ENST00000241704 hCG_1642624A0A1W2PR95 340 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 BICDL2A1A5D9 508 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 PABPC4Q13310 644 aaKnown RBP eCLIP12.21□□□□□ -0.451e-7■■■□□ 15.2
COPA-201ENST00000241704 PACS2Q86VP3 889 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 ATRIPQ8WXE1 791 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 USP28Q96RU2 1077 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 RABEP2Q9H5N1 569 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 ODF2LQ9ULJ1 636 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 COL15A1P39059 1388 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 POLR2DO15514 142 aaKnown RBP12.21□□□□□ -0.45
COPA-201ENST00000241704 ZEB2O60315 1214 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 FAM13AO94988 1023 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 MCAMP43121 646 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 STX17P56962 302 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 FOXO4P98177 505 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 TXNRD1Q16881 649 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 EPC1Q9H2F5 836 aa12.21□□□□□ -0.45
COPA-201ENST00000241704 NPR1P16066 1061 aa12.21□□□□□ -0.46
COPA-201ENST00000241704 NOSTRINQ8IVI9 506 aa12.21□□□□□ -0.46
COPA-201ENST00000241704 CHURC1Q8WUH1 139 aa12.21□□□□□ -0.46
COPA-201ENST00000241704 N4BP2L2Q92802 583 aaPredicted RBP12.21□□□□□ -0.46
COPA-201ENST00000241704 IMPG2Q9BZV3 1241 aa12.21□□□□□ -0.46
COPA-201ENST00000241704 PIH1D3Q9NQM4 214 aaKnown RBP12.21□□□□□ -0.46
COPA-201ENST00000241704 GRAPQ13588 217 aa12.21□□□□□ -0.46
COPA-201ENST00000241704 APOA5Q6Q788 366 aa12.21□□□□□ -0.46
COPA-201ENST00000241704 HS2ST1Q7LGA3 356 aa12.21□□□□□ -0.46
COPA-201ENST00000241704 GRAPLQ8TC17 118 aaPredicted RBP12.21□□□□□ -0.46
COPA-201ENST00000241704 PLIN2Q99541 437 aa12.21□□□□□ -0.46
COPA-201ENST00000241704 SLC5A4Q9NY91 659 aa12.21□□□□□ -0.46
COPA-201ENST00000241704 KIAA1468Q9P260 1216 aa12.21□□□□□ -0.46
COPA-201ENST00000241704 PLEKHG2Q9H7P9 1386 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 ITSN1Q15811 1721 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 CLRN2A0PK11 232 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 CFBP00751 764 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 CASP8Q14790 479 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 SUGP1Q8IWZ8 645 aaKnown RBP12.2□□□□□ -0.46
COPA-201ENST00000241704 MACROD2A1Z1Q3 448 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 DDAH1O94760 285 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 LARGE1O95461 756 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 GCKP35557 465 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 ADCY7P51828 1080 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 SV2BQ7L1I2 683 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 FNBP4Q8N3X1 1017 aaPredicted RBP12.2□□□□□ -0.46
COPA-201ENST00000241704 CDC23Q9UJX2 597 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 DCCP43146 1447 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 SLIT1O75093 1534 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 GOLGA6BA6NDN3 693 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 AKR1B15C9JRZ8 316 aaPredicted RBP12.2□□□□□ -0.46
COPA-201ENST00000241704 ERCC3P19447 782 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 FAM212AQ96EL1 285 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.2□□□□□ -0.46
COPA-201ENST00000241704 CAPS2Q9BXY5 557 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 SPC25Q9HBM1 224 aa12.2□□□□□ -0.46
COPA-201ENST00000241704 CCNT1O60563 726 aaKnown RBP12.19□□□□□ -0.46
COPA-201ENST00000241704 WHAMMP3Q1A5X7 153 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 USH1GQ495M9 461 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 LCORLQ8N3X6 602 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 NSUN7Q8NE18 718 aaKnown RBP12.19□□□□□ -0.46
COPA-201ENST00000241704 TTC16Q8NEE8 873 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 KIFC2Q96AC6 838 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 PXDNLA1KZ92 1463 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 COL3A1P02461 1466 aaPredicted RBP12.19□□□□□ -0.46
COPA-201ENST00000241704 KCNQ2O43526 872 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 PPP1R2P41236 205 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 GNGT1P63211 74 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 SUPT20HL1Q3ZLR7 823 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 GADL1Q6ZQY3 521 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 CMTR1Q8N1G2 835 aaKnown RBP12.19□□□□□ -0.46
COPA-201ENST00000241704 ABCB6Q9NP58 842 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 SPATS2LQ9NUQ6 558 aaKnown RBP12.19□□□□□ -0.46
COPA-201ENST00000241704 C21orf2O43822 256 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 ZRANB2O95218 330 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■□□□ 12.5
COPA-201ENST00000241704 DYNLL1P63167 89 aaKnown RBP12.19□□□□□ -0.46
COPA-201ENST00000241704 IQCB1Q15051 598 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 SPECC1Q5M775 1068 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 MASTLQ96GX5 879 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 TAOK3Q9H2K8 898 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 FAM169AQ9Y6X4 670 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 RFX7Q2KHR2 1363 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 CHUKO15111 745 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 PRKAB2O43741 272 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 ADRA2BP18089 450 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 PPFIA1Q13136 1202 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 CERKLQ49MI3 558 aaPredicted RBP12.19□□□□□ -0.46
COPA-201ENST00000241704 EHBP1Q8NDI1 1231 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 SPAG5Q96R06 1193 aa12.19□□□□□ -0.46
COPA-201ENST00000241704 ARHGAP23Q9P227 1491 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 CPDO75976 1380 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 AKR1B10O60218 316 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 STX10O60499 249 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 PPM1FP49593 454 aaPredicted RBP12.18□□□□□ -0.46
COPA-201ENST00000241704 NKX1-1Q15270 411 aaPredicted RBP12.18□□□□□ -0.46
COPA-201ENST00000241704 MLKLQ8NB16 471 aa12.18□□□□□ -0.46
COPA-201ENST00000241704 CHMP2AO43633 222 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms