RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 MTMR14Q8NCE2 650 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 CNNM3Q8NE01 707 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 WASF1Q92558 559 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 GOLGA1Q92805 767 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 EXOC4Q96A65 974 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 ZDHHC15Q96MV8 337 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 FUT8Q9BYC5 575 aa23.31■■□□□ 1.32
SNX3-201ENST00000230085 TMEM232C9JQI7 657 aa23.3■■□□□ 1.32
SNX3-201ENST00000230085 PDE6AP16499 860 aa23.3■■□□□ 1.32
SNX3-201ENST00000230085 CYP7A1P22680 504 aa23.3■■□□□ 1.32
SNX3-201ENST00000230085 UBE3CQ15386 1083 aa23.3■■□□□ 1.32
SNX3-201ENST00000230085 LONRF3Q496Y0 759 aa23.3■■□□□ 1.32
SNX3-201ENST00000230085 APOBEC3HQ6NTF7 200 aaKnown RBP23.3■■□□□ 1.32
SNX3-201ENST00000230085 PNMA8AQ86V59 439 aaPredicted RBP23.3■■□□□ 1.32
SNX3-201ENST00000230085 FAM163AQ96GL9 167 aaPredicted RBP23.3■■□□□ 1.32
SNX3-201ENST00000230085 ZBED3Q96IU2 234 aaPredicted RBP23.3■■□□□ 1.32
SNX3-201ENST00000230085 ASTN2O75129 1339 aaPredicted RBP23.3■■□□□ 1.32
SNX3-201ENST00000230085 SASH3O75995 380 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 PTPREP23469 700 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 ADD2P35612 726 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 HNRNPH2P55795 449 aaKnown RBP23.29■■□□□ 1.32
SNX3-201ENST00000230085 GSTO1P78417 241 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 SLF2Q8IX21 1173 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 PUS7LQ9H0K6 701 aaKnown RBP23.29■■□□□ 1.32
SNX3-201ENST00000230085 GAKO14976 1311 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 A0A1B0GTH6 734 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 TCRBV5S4A2TA0A5A2 114 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 TUBBP07437 444 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 TXLNAP40222 546 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 HAND2P61296 217 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 NR1I3Q14994 352 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 WDR24Q96S15 920 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 GJB4Q9NTQ9 266 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 MAN1B1Q9UKM7 699 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 RAB21Q9UL25 225 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 ZNF532Q9HCE3 1301 aa23.29■■□□□ 1.32
SNX3-201ENST00000230085 KIF3CO14782 793 aa23.28■■□□□ 1.32
SNX3-201ENST00000230085 LDHCP07864 332 aa23.28■■□□□ 1.32
SNX3-201ENST00000230085 GNG11P61952 73 aa23.28■■□□□ 1.32
SNX3-201ENST00000230085 SMC1AQ14683 1233 aaKnown RBP23.28■■□□□ 1.32
SNX3-201ENST00000230085 POSTNQ15063 836 aa23.28■■□□□ 1.32
SNX3-201ENST00000230085 IGDCC4Q8TDY8 1250 aa23.28■■□□□ 1.32
SNX3-201ENST00000230085 TDRD3Q9H7E2 651 aaKnown RBP23.28■■□□□ 1.32
SNX3-201ENST00000230085 MAST2Q6P0Q8 1798 aa23.28■■□□□ 1.32
SNX3-201ENST00000230085 PPFIA3O75145 1194 aa23.27■■□□□ 1.32
SNX3-201ENST00000230085 PDE4BQ07343 736 aa23.27■■□□□ 1.32
SNX3-201ENST00000230085 TRIM29Q14134 588 aa23.27■■□□□ 1.32
SNX3-201ENST00000230085 MSANTD4Q8NCY6 345 aa23.27■■□□□ 1.32
SNX3-201ENST00000230085 FOXP1Q9H334 677 aaPredicted RBP23.27■■□□□ 1.32
SNX3-201ENST00000230085 GPR75-ASB3A0A0A6YYF3 556 aa23.27■■□□□ 1.32
SNX3-201ENST00000230085 FMNL1O95466 1100 aaPredicted RBP23.27■■□□□ 1.32
SNX3-201ENST00000230085 IFNAR1P17181 557 aa23.27■■□□□ 1.32
SNX3-201ENST00000230085 BTDP43251 543 aa23.27■■□□□ 1.32
SNX3-201ENST00000230085 RILPL1Q5EBL4 403 aa23.27■■□□□ 1.32
SNX3-201ENST00000230085 NOSTRINQ8IVI9 506 aa23.27■■□□□ 1.32
SNX3-201ENST00000230085 MIGA1Q8NAN2 632 aa23.27■■□□□ 1.32
SNX3-201ENST00000230085 PARD6BQ9BYG5 372 aa23.27■■□□□ 1.32
SNX3-201ENST00000230085 FAM217BQ9NTX9 383 aaPredicted RBP23.27■■□□□ 1.32
SNX3-201ENST00000230085 AATFQ9NY61 560 aaKnown RBP eCLIP23.27■■□□□ 1.32
SNX3-201ENST00000230085 POLR2AP24928 1970 aaKnown RBP23.26■■□□□ 1.31
SNX3-201ENST00000230085 CLRN2A0PK11 232 aa23.26■■□□□ 1.31
SNX3-201ENST00000230085 ZBTB43O43298 467 aa23.26■■□□□ 1.31
SNX3-201ENST00000230085 CCDC175P0C221 793 aa23.26■■□□□ 1.31
SNX3-201ENST00000230085 OAS2P29728 719 aaKnown RBP23.26■■□□□ 1.31
SNX3-201ENST00000230085 SRGAP1Q7Z6B7 1085 aa23.26■■□□□ 1.31
SNX3-201ENST00000230085 CCDC51Q96ER9 411 aa23.26■■□□□ 1.31
SNX3-201ENST00000230085 FBXO2Q9UK22 296 aaPredicted RBP23.26■■□□□ 1.31
SNX3-201ENST00000230085 SCAF8Q9UPN6 1271 aaKnown RBP23.26■■□□□ 1.31
SNX3-201ENST00000230085 CLEC11AQ9Y240 323 aa23.26■■□□□ 1.31
SNX3-201ENST00000230085 ERICH4A6NGS2 130 aa23.25■■□□□ 1.31
SNX3-201ENST00000230085 CDC27P30260 824 aa23.25■■□□□ 1.31
SNX3-201ENST00000230085 PBX1P40424 430 aa23.25■■□□□ 1.31
SNX3-201ENST00000230085 PLCD1P51178 756 aa23.25■■□□□ 1.31
SNX3-201ENST00000230085 CYB5R4Q7L1T6 521 aa23.25■■□□□ 1.31
SNX3-201ENST00000230085 STK11IPQ8N1F8 1099 aa23.25■■□□□ 1.31
SNX3-201ENST00000230085 CEP112Q8N8E3 955 aa23.25■■□□□ 1.31
SNX3-201ENST00000230085 NFE2L3Q9Y4A8 694 aa23.25■■□□□ 1.31
SNX3-201ENST00000230085 ANGEL2Q5VTE6 544 aaKnown RBP23.24■■□□□ 1.31
SNX3-201ENST00000230085 CDC42EP5Q6NZY7 148 aa23.24■■□□□ 1.31
SNX3-201ENST00000230085 TBC1D10CQ8IV04 446 aa23.24■■□□□ 1.31
SNX3-201ENST00000230085 LY9Q9HBG7 655 aa23.24■■□□□ 1.31
SNX3-201ENST00000230085 GGA3Q9NZ52 723 aa23.24■■□□□ 1.31
SNX3-201ENST00000230085 ITIH6Q6UXX5 1313 aa23.24■■□□□ 1.31
SNX3-201ENST00000230085 RANBP6O60518 1105 aaKnown RBP23.24■■□□□ 1.31
SNX3-201ENST00000230085 CACNB3P54284 484 aa23.24■■□□□ 1.31
SNX3-201ENST00000230085 DYNLL1P63167 89 aaKnown RBP23.24■■□□□ 1.31
SNX3-201ENST00000230085 TMED8Q6PL24 325 aaPredicted RBP23.24■■□□□ 1.31
SNX3-201ENST00000230085 TOGARAM2Q6ZUX3 1019 aa23.24■■□□□ 1.31
SNX3-201ENST00000230085 APTXQ7Z2E3 356 aaKnown RBP23.24■■□□□ 1.31
SNX3-201ENST00000230085 AIFM3Q96NN9 605 aa23.24■■□□□ 1.31
SNX3-201ENST00000230085 USP40Q9NVE5 1235 aa23.24■■□□□ 1.31
SNX3-201ENST00000230085 SEC31AO94979 1220 aaKnown RBP23.23■■□□□ 1.31
SNX3-201ENST00000230085 MMP1P03956 469 aa23.23■■□□□ 1.31
SNX3-201ENST00000230085 GNL2Q13823 731 aaKnown RBP23.23■■□□□ 1.31
SNX3-201ENST00000230085 ZC3H15Q8WU90 426 aaKnown RBP23.23■■□□□ 1.31
SNX3-201ENST00000230085 SMARCE1Q969G3 411 aa23.23■■□□□ 1.31
SNX3-201ENST00000230085 CLIC6Q96NY7 704 aa23.23■■□□□ 1.31
SNX3-201ENST00000230085 ZNF70Q9UC06 446 aaPredicted RBP23.23■■□□□ 1.31
SNX3-201ENST00000230085 SRPRBQ9Y5M8 271 aaKnown RBP23.23■■□□□ 1.31
SNX3-201ENST00000230085 AKR1B15C9JRZ8 316 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms