RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 PTH1RQ03431 593 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 TMEM62Q0P6H9 643 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 TMEM94Q12767 1356 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 PPFIA1Q13136 1202 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 PRPF40BQ6NWY9 871 aaKnown RBP6.36□□□□□ -1.39
RFX4-201ENST00000229387 CYB5D1Q6P9G0 228 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 CCDC73Q6ZRK6 1079 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 LUZP1Q86V48 1076 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 TTC5Q8N0Z6 440 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 DEPDC4Q8N2C3 294 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 TEX9Q8N6V9 391 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 PPP2R3CQ969Q6 453 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 NACC2Q96BF6 587 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 ANKRD27Q96NW4 1050 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 YIPF3Q9GZM5 350 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 SENP2Q9HC62 589 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 HOOK1Q9UJC3 728 aaKnown RBP6.36□□□□□ -1.39
RFX4-201ENST00000229387 ITM2BQ9Y287 266 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 TAF6LQ9Y6J9 622 aa6.36□□□□□ -1.39
RFX4-201ENST00000229387 SH3TC1Q8TE82 1336 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 GPR75-ASB3A0A0A6YYF3 556 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 GOLGA6L7A0A1B0GV03 622 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 RNF40O75150 1001 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 LUC7L3O95232 432 aaKnown RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 NPTXRO95502 500 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 MCM3P25205 808 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 HOXD10P28358 340 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 MAP3K11Q16584 847 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 KIRREL3Q8IZU9 778 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 CLASRPQ8N2M8 674 aaKnown RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 CCHCR1Q8TD31 782 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 SSH3Q8TE77 659 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 TAF4BQ92750 862 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 PRDM11Q9NQV5 511 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 WDR35Q9P2L0 1181 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 DMGDHQ9UI17 866 aaKnown RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 TMCO1Q9UM00 188 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 ASB3Q9Y575 518 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 ITSN1Q15811 1721 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 ARHGAP23Q9P227 1491 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 SOWAHDA6NJG2 315 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 PIK3CDO00329 1044 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 ATG7O95352 703 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 SYF2O95926 243 aaKnown RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 IGKV5-2P06315 115 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 KCNA2P16389 499 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 TATP17735 454 aaPredicted RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 ATP4AP20648 1035 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 GNAQP50148 359 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 CABP4P57796 275 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 NSUN2Q08J23 767 aaKnown RBP eCLIP6.35□□□□□ -1.39
RFX4-201ENST00000229387 STK3Q13188 491 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 MTMR3Q13615 1198 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 CASP8Q14790 479 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 ADCK5Q3MIX3 580 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 PACS1Q6VY07 963 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 CCDC13Q8IYE1 715 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 FUKQ8N0W3 1084 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 NECAB1Q8N987 351 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 ZBTB8BQ8NAP8 495 aaPredicted RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 EAF2Q96CJ1 260 aaPredicted RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 KAZALD1Q96I82 304 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 ATXN10Q9UBB4 475 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 CIDEBQ9UHD4 219 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 TMED5Q9Y3A6 229 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 ATP6V1DQ9Y5K8 247 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 MON2Q7Z3U7 1717 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 HMGB1P1B2RPK0 211 aaPredicted RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 FIBPO43427 364 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 CBFA2T2O43439 604 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 CCDC166P0CW27 439 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 NAT2P11245 290 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 HDLBPQ00341 1268 aaKnown RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 PPP2R3AQ06190 1150 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 ZNF211Q13398 564 aaPredicted RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 TBC1D10BQ4KMP7 808 aaPredicted RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 KSR2Q6VAB6 950 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 FCHSD1Q86WN1 690 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 PI4K2BQ8TCG2 481 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 BCAS4Q8TDM0 211 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 ZNF594Q96JF6 807 aaPredicted RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 NEUROD6Q96NK8 337 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 IWS1Q96ST2 819 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 MAK16Q9BXY0 300 aaKnown RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 HOXC10Q9NYD6 342 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 MAGEC2Q9UBF1 373 aaPredicted RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 TPX2Q9ULW0 747 aaKnown RBP6.35□□□□□ -1.39
RFX4-201ENST00000229387 C15orf41Q9Y2V0 281 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 PIK3C2AO00443 1686 aa6.35□□□□□ -1.39
RFX4-201ENST00000229387 GOLGA8AA7E2F4 631 aa6.34□□□□□ -1.39
RFX4-201ENST00000229387 GRM8O00222 908 aa6.34□□□□□ -1.39
RFX4-201ENST00000229387 EIF3FO00303 357 aaPredicted RBP6.34□□□□□ -1.39
RFX4-201ENST00000229387 PARP1P09874 1014 aaKnown RBP6.34□□□□□ -1.39
RFX4-201ENST00000229387 PDHBP11177 359 aa6.34□□□□□ -1.39
RFX4-201ENST00000229387 TUBB2AQ13885 445 aa6.34□□□□□ -1.39
RFX4-201ENST00000229387 USH1GQ495M9 461 aa6.34□□□□□ -1.39
RFX4-201ENST00000229387 FAM173BQ6P4H8 233 aa6.34□□□□□ -1.39
RFX4-201ENST00000229387 OLFML1Q6UWY5 402 aa6.34□□□□□ -1.39
RFX4-201ENST00000229387 CCDC129Q6ZRS4 1044 aa6.34□□□□□ -1.39
RFX4-201ENST00000229387 RASSF8Q8NHQ8 419 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms