RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 ORC4O43929 436 aa16.84■□□□□ 0.29
GPN3-201ENST00000228827 MCCP23508 829 aa16.84■□□□□ 0.29
GPN3-201ENST00000228827 IKQ13123 557 aaPredicted RBP16.84■□□□□ 0.29
GPN3-201ENST00000228827 KCTD2Q14681 263 aa16.84■□□□□ 0.29
GPN3-201ENST00000228827 TRPV1Q8NER1 839 aa16.84■□□□□ 0.29
GPN3-201ENST00000228827 C11orf49Q9H6J7 331 aa16.84■□□□□ 0.29
GPN3-201ENST00000228827 RAVER2Q9HCJ3 691 aaKnown RBP16.84■□□□□ 0.29
GPN3-201ENST00000228827 EVI5O60447 810 aa16.83■□□□□ 0.28
GPN3-201ENST00000228827 PPP4R3BQ5MIZ7 849 aa16.83■□□□□ 0.28
GPN3-201ENST00000228827 OLFML2BQ68BL8 750 aa16.83■□□□□ 0.28
GPN3-201ENST00000228827 RASGRP2Q7LDG7 609 aa16.83■□□□□ 0.28
GPN3-201ENST00000228827 MAML3Q96JK9 1138 aa16.83■□□□□ 0.28
GPN3-201ENST00000228827 TEX13BQ9BXU2 312 aa16.83■□□□□ 0.28
GPN3-201ENST00000228827 NBPF3Q9H094 633 aa16.83■□□□□ 0.28
GPN3-201ENST00000228827 DDX20Q9UHI6 824 aaKnown RBP16.83■□□□□ 0.28
GPN3-201ENST00000228827 RIPK3Q9Y572 518 aa16.83■□□□□ 0.28
GPN3-201ENST00000228827 IGHA2P01877 340 aa16.82■□□□□ 0.28
GPN3-201ENST00000228827 FGRP09769 529 aa16.82■□□□□ 0.28
GPN3-201ENST00000228827 CYBAP13498 195 aa16.82■□□□□ 0.28
GPN3-201ENST00000228827 COPB2P35606 906 aa16.82■□□□□ 0.28
GPN3-201ENST00000228827 SLC1A4P43007 532 aa16.82■□□□□ 0.28
GPN3-201ENST00000228827 PRAMEF19Q5SWL8 479 aa16.82■□□□□ 0.28
GPN3-201ENST00000228827 KCTD1Q719H9 257 aa16.82■□□□□ 0.28
GPN3-201ENST00000228827 SLC38A10Q9HBR0 1119 aa16.82■□□□□ 0.28
GPN3-201ENST00000228827 ZMYM6O95789 1325 aa16.82■□□□□ 0.28
GPN3-201ENST00000228827 HIP1O00291 1037 aa16.81■□□□□ 0.28
GPN3-201ENST00000228827 HABP4Q5JVS0 413 aaKnown RBP16.81■□□□□ 0.28
GPN3-201ENST00000228827 ANO1Q5XXA6 986 aa16.81■□□□□ 0.28
GPN3-201ENST00000228827 TBC1D10CQ8IV04 446 aa16.81■□□□□ 0.28
GPN3-201ENST00000228827 GMCL1Q96IK5 515 aa16.81■□□□□ 0.28
GPN3-201ENST00000228827 COLQQ9Y215 455 aaPredicted RBP16.81■□□□□ 0.28
GPN3-201ENST00000228827 NR2E3Q9Y5X4 410 aa16.81■□□□□ 0.28
GPN3-201ENST00000228827 GSPT1P15170 499 aaKnown RBP16.8■□□□□ 0.28
GPN3-201ENST00000228827 STAT2P52630 851 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 AKNAD1Q5T1N1 836 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 TTC22Q5TAA0 569 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 CHRDL2Q6WN34 429 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 MFSD6Q6ZSS7 791 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 C7orf61Q8IZ16 206 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 STAG1Q8WVM7 1258 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 PFASO15067 1338 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 ZNF236Q9UL36 1845 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 ATP2A1O14983 1001 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 SNAP25P60880 206 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 CCDC96Q2M329 555 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 ZNF792Q3KQV3 632 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 FAM160B2Q86V87 743 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 CHURC1Q8WUH1 139 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 DDX11Q96FC9 970 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 HOMER2Q9NSB8 354 aa16.8■□□□□ 0.28
GPN3-201ENST00000228827 NEDD4P46934 1319 aa16.79■□□□□ 0.28
GPN3-201ENST00000228827 PARP14Q460N5 1801 aa16.79■□□□□ 0.28
GPN3-201ENST00000228827 ZNF213O14771 459 aa16.79■□□□□ 0.28
GPN3-201ENST00000228827 RCSD1Q6JBY9 416 aa16.79■□□□□ 0.28
GPN3-201ENST00000228827 IL25Q9H293 177 aa16.79■□□□□ 0.28
GPN3-201ENST00000228827 MSCO60682 206 aa16.78■□□□□ 0.28
GPN3-201ENST00000228827 MYCNP04198 464 aaPredicted RBP16.78■□□□□ 0.28
GPN3-201ENST00000228827 TOP1P11387 765 aaKnown RBP16.78■□□□□ 0.28
GPN3-201ENST00000228827 NOVP48745 357 aa16.78■□□□□ 0.28
GPN3-201ENST00000228827 CCDC174Q6PII3 467 aa16.78■□□□□ 0.28
GPN3-201ENST00000228827 AGBL1Q96MI9 1066 aa16.78■□□□□ 0.28
GPN3-201ENST00000228827 TMEM47Q9BQJ4 181 aa16.78■□□□□ 0.28
GPN3-201ENST00000228827 ZKSCAN3Q9BRR0 538 aa16.78■□□□□ 0.28
GPN3-201ENST00000228827 TINF2Q9BSI4 451 aa16.78■□□□□ 0.28
GPN3-201ENST00000228827 RNF41Q9H4P4 317 aaPredicted RBP16.78■□□□□ 0.28
GPN3-201ENST00000228827 COL11A1P12107 1806 aaPredicted RBP16.77■□□□□ 0.28
GPN3-201ENST00000228827 SEPT4O43236 478 aa16.77■□□□□ 0.28
GPN3-201ENST00000228827 SLC34A2O95436 690 aa16.77■□□□□ 0.28
GPN3-201ENST00000228827 COL6A1P12109 1028 aa16.77■□□□□ 0.28
GPN3-201ENST00000228827 TAL1P17542 331 aaPredicted RBP16.77■□□□□ 0.28
GPN3-201ENST00000228827 OAZ1P54368 228 aa16.77■□□□□ 0.28
GPN3-201ENST00000228827 ANKRD35Q8N283 1001 aa16.77■□□□□ 0.28
GPN3-201ENST00000228827 DCAF4Q8WV16 495 aa16.77■□□□□ 0.28
GPN3-201ENST00000228827 TCP11L1Q9NUJ3 509 aa16.77■□□□□ 0.28
GPN3-201ENST00000228827 ZMYND8Q9ULU4 1186 aaPredicted RBP16.77■□□□□ 0.28
GPN3-201ENST00000228827 DIS3Q9Y2L1 958 aaKnown RBP16.77■□□□□ 0.28
GPN3-201ENST00000228827 FRMPD2Q68DX3 1309 aaPredicted RBP16.77■□□□□ 0.27
GPN3-201ENST00000228827 MYH4Q9Y623 1939 aa16.76■□□□□ 0.27
GPN3-201ENST00000228827 FDX1P10109 184 aa16.76■□□□□ 0.27
GPN3-201ENST00000228827 SLC16A2P36021 539 aa16.76■□□□□ 0.27
GPN3-201ENST00000228827 GJC2Q5T442 439 aaPredicted RBP16.76■□□□□ 0.27
GPN3-201ENST00000228827 TTBK2Q6IQ55 1244 aa16.76■□□□□ 0.27
GPN3-201ENST00000228827 CHST13Q8NET6 341 aa16.76■□□□□ 0.27
GPN3-201ENST00000228827 ESR2Q92731 530 aa16.76■□□□□ 0.27
GPN3-201ENST00000228827 DSCC1Q9BVC3 393 aa16.76■□□□□ 0.27
GPN3-201ENST00000228827 SENP6Q9GZR1 1112 aaPredicted RBP16.76■□□□□ 0.27
GPN3-201ENST00000228827 GPCPD1Q9NPB8 672 aa16.76■□□□□ 0.27
GPN3-201ENST00000228827 FBXO40Q9UH90 709 aa16.76■□□□□ 0.27
GPN3-201ENST00000228827 PRR12Q9ULL5 1215 aa16.76■□□□□ 0.27
GPN3-201ENST00000228827 ZNF536O15090 1300 aa16.76■□□□□ 0.27
GPN3-201ENST00000228827 PLA2G6O60733 806 aa16.75■□□□□ 0.27
GPN3-201ENST00000228827 PCP11498 1178 aaKnown RBP16.75■□□□□ 0.27
GPN3-201ENST00000228827 ALAS1P13196 640 aa16.75■□□□□ 0.27
GPN3-201ENST00000228827 IMMTQ16891 758 aaKnown RBP16.75■□□□□ 0.27
GPN3-201ENST00000228827 LRRC26Q2I0M4 334 aa16.75■□□□□ 0.27
GPN3-201ENST00000228827 RNF146Q9NTX7 359 aa16.75■□□□□ 0.27
GPN3-201ENST00000228827 PCDH10Q9P2E7 1040 aa16.75■□□□□ 0.27
GPN3-201ENST00000228827 RBM27Q9P2N5 1060 aaKnown RBP16.75■□□□□ 0.27
GPN3-201ENST00000228827 DNAJC25-GNG10A0A024R161 153 aa16.74■□□□□ 0.27
GPN3-201ENST00000228827 B4E1Z4 1266 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms