RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 DISC1Q9NRI5 854 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 PARP3Q9Y6F1 533 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 V9GYY5 206 aaPredicted RBP24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 BAZ2BQ9UIF8 2168 aaKnown RBP24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 USP17L3A6NCW0 530 aa24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 USP17L4A6NCW7 530 aa24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 SPDYE4A6NLX3 237 aa24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 URI1O94763 535 aaPredicted RBP24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 IL1R1P14778 569 aa24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 RBL2Q08999 1139 aa24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 KCNB1Q14721 858 aa24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 DIXDC1Q155Q3 683 aa24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 C16orf86Q6ZW13 317 aa24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 USP17L1Q7RTZ2 530 aa24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 FAM163AQ96GL9 167 aaPredicted RBP24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 BLZF1Q9H2G9 400 aa24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 CUEDC2Q9H467 287 aa24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 DDX60LQ5H9U9 1706 aaKnown RBP24.83■■□□□ 1.57
SMARCD2-201ENST00000225742 EFCAB8A8MWE9 144 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 ADAMTS3O15072 1205 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 MFAP3LO75121 409 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 SMYD4Q8IYR2 804 aaPredicted RBP24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 NEDD1Q8NHV4 660 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 GTPBP4Q9BZE4 634 aaKnown RBP24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 H7C1D1 291 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 GNG11P61952 73 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 ERCC6LQ2NKX8 1250 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 UTP14CQ5TAP6 766 aaKnown RBP24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 KRT25Q7Z3Z0 450 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 NELFBQ8WX92 580 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 UBXN4Q92575 508 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 CD209Q9NNX6 404 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 USP21Q9UK80 565 aa24.82■■□□□ 1.56
SMARCD2-201ENST00000225742 BTDP43251 543 aa24.81■■□□□ 1.56
SMARCD2-201ENST00000225742 MAP3K9P80192 1104 aa24.81■■□□□ 1.56
SMARCD2-201ENST00000225742 GPSM2P81274 684 aa24.81■■□□□ 1.56
SMARCD2-201ENST00000225742 ORC2Q13416 577 aaPredicted RBP24.81■■□□□ 1.56
SMARCD2-201ENST00000225742 KRT31Q15323 416 aa24.81■■□□□ 1.56
SMARCD2-201ENST00000225742 CRY2Q49AN0 593 aa24.81■■□□□ 1.56
SMARCD2-201ENST00000225742 TYW1BQ6NUM6 668 aa24.81■■□□□ 1.56
SMARCD2-201ENST00000225742 STAMQ92783 540 aa24.81■■□□□ 1.56
SMARCD2-201ENST00000225742 AK8Q96MA6 479 aa24.81■■□□□ 1.56
SMARCD2-201ENST00000225742 ZMYND12Q9H0C1 365 aa24.81■■□□□ 1.56
SMARCD2-201ENST00000225742 FAM53CQ9NYF3 392 aa24.81■■□□□ 1.56
SMARCD2-201ENST00000225742 CYTH3O43739 400 aa24.8■■□□□ 1.56
SMARCD2-201ENST00000225742 SLC35G1Q2M3R5 365 aa24.8■■□□□ 1.56
SMARCD2-201ENST00000225742 PRR5LQ6MZQ0 368 aa24.8■■□□□ 1.56
SMARCD2-201ENST00000225742 HEATR3Q7Z4Q2 680 aa24.8■■□□□ 1.56
SMARCD2-201ENST00000225742 MAPKAPK5Q8IW41 473 aa24.8■■□□□ 1.56
SMARCD2-201ENST00000225742 TBC1D22AQ8WUA7 517 aa24.8■■□□□ 1.56
SMARCD2-201ENST00000225742 RBM17Q96I25 401 aaKnown RBP24.8■■□□□ 1.56
SMARCD2-201ENST00000225742 ZMYND15Q9H091 742 aa24.8■■□□□ 1.56
SMARCD2-201ENST00000225742 TADA3O75528 432 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 CDK8P49336 464 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 COPB1P53618 953 aaKnown RBP24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 GRIK5Q16478 980 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 FAM196AQ6ZSG2 479 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 EYA3Q99504 573 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 GGA1Q9UJY5 639 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 KLRF2D3W0D1 207 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 N4BP3O15049 544 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 UBA7P41226 1012 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 SLC4A8Q2Y0W8 1093 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 TCP11X2Q5H9J9 407 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 TMTC1Q8IUR5 882 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 TEX11Q8IYF3 940 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 ARGLU1Q9NWB6 273 aaPredicted RBP24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 STX8Q9UNK0 236 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 ADGRG1Q9Y653 693 aa24.79■■□□□ 1.56
SMARCD2-201ENST00000225742 SNED1Q8TER0 1413 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 KCNJ18B7U540 433 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 FANCGO15287 622 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 BBOX1O75936 387 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 UFL1O94874 794 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 PARP1P09874 1014 aaKnown RBP24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 ZSCAN20P17040 1043 aaPredicted RBP24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 GNA11P29992 359 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 NOVP48745 357 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 ST5P78524 1137 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 STIM1Q13586 685 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 KCNJ12Q14500 433 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 KARSQ15046 597 aaKnown RBP24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 ADSSL1Q8N142 457 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 NOC3LQ8WTT2 800 aaKnown RBP24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 KIFC2Q96AC6 838 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 C6orf50Q9HD87 102 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 PODXL2Q9NZ53 605 aa24.78■■□□□ 1.56
SMARCD2-201ENST00000225742 hCG_1984214I3L0E3 225 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 DMTNQ08495 405 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 TUBB2AQ13885 445 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 INF2Q27J81 1249 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 ARHGAP29Q52LW3 1261 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 RASGRP2Q7LDG7 609 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 KRT222Q8N1A0 295 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 ZNF713Q8N859 430 aaPredicted RBP24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 RASGRP4Q8TDF6 673 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 TUBB2BQ9BVA1 445 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 KBTBD4Q9NVX7 518 aa24.77■■□□□ 1.56
SMARCD2-201ENST00000225742 SAP30BPQ9UHR5 308 aaKnown RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms