RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 KCNJ6P48051 423 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 FAM193AP78312 1265 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 ATP2C1P98194 919 aaPredicted RBP16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 GABPB1Q06547 395 aaPredicted RBP16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 DYMQ7RTS9 669 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 WDR24Q96S15 920 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 EPC1Q9H2F5 836 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 CRYBG1Q9Y4K1 1723 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 POTEB2H3BUK9 544 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 REXO1Q8N1G1 1221 aaKnown RBP16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 TC2NQ8N9U0 490 aa16.79■□□□□ 0.28
UBE2D4-201ENST00000222402 PP2D1A8MPX8 630 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 FGFR1OPO95684 399 aaKnown RBP16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 CCDC40Q4G0X9 1142 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 KRT79Q5XKE5 535 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 USP17L2Q6R6M4 530 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 FBXO33Q7Z6M2 555 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 DGKHQ86XP1 1220 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 CCDC51Q96ER9 411 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 IRX2Q9BZI1 471 aaPredicted RBP16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 TACC3Q9Y6A5 838 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 H7C1D1 291 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 USO1O60763 962 aaKnown RBP16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 BMP6P22004 513 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 DMTNQ08495 405 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 PKN1Q16512 942 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 ZNF658Q5TYW1 1059 aaPredicted RBP16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 FAM196AQ6ZSG2 479 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 SV2BQ7L1I2 683 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 ATRNO75882 1429 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 GPR161Q8N6U8 529 aaKnown RBP16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 CCDC42Q96M95 316 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 ZC3H12CQ9C0D7 883 aaKnown RBP16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 LRWD1Q9UFC0 647 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 FRMPD2Q68DX3 1309 aaPredicted RBP16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 CNTNAP5Q8WYK1 1306 aa16.78■□□□□ 0.28
UBE2D4-201ENST00000222402 KRT86O43790 486 aa16.77■□□□□ 0.28
UBE2D4-201ENST00000222402 OR8K1Q8NGG5 319 aa16.77■□□□□ 0.28
UBE2D4-201ENST00000222402 PANX2Q96RD6 677 aa16.77■□□□□ 0.28
UBE2D4-201ENST00000222402 LEMD3Q9Y2U8 911 aa16.77■□□□□ 0.28
UBE2D4-201ENST00000222402 XDHP47989 1333 aa16.77■□□□□ 0.28
UBE2D4-201ENST00000222402 MFAP3LO75121 409 aa16.77■□□□□ 0.28
UBE2D4-201ENST00000222402 OR52Z1P0C646 297 aa16.77■□□□□ 0.28
UBE2D4-201ENST00000222402 GTF2IP78347 998 aa16.77■□□□□ 0.28
UBE2D4-201ENST00000222402 KRT83P78385 493 aa16.77■□□□□ 0.28
UBE2D4-201ENST00000222402 SKIDA1Q1XH10 827 aa16.77■□□□□ 0.28
UBE2D4-201ENST00000222402 LZTS2Q9BRK4 669 aa16.77■□□□□ 0.28
UBE2D4-201ENST00000222402 TRIM49BA6NDI0 452 aa16.77■□□□□ 0.27
UBE2D4-201ENST00000222402 HLA-DOAP06340 250 aa16.77■□□□□ 0.27
UBE2D4-201ENST00000222402 SLC35F6Q8N357 371 aa16.77■□□□□ 0.27
UBE2D4-201ENST00000222402 RWDD2AQ9UIY3 292 aa16.77■□□□□ 0.27
UBE2D4-201ENST00000222402 LRRC47Q8N1G4 583 aaKnown RBP16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 DISC1Q9NRI5 854 aa16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 PARP4Q9UKK3 1724 aaKnown RBP16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 MACROD2A1Z1Q3 448 aa16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 ARL6IP4Q66PJ3 421 aaKnown RBP16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 TXNRD3Q86VQ6 643 aa16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 ARHGEF1Q92888 912 aaKnown RBP16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 USP21Q9UK80 565 aa16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 A0A1B0GTH6 734 aa16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 DPYDQ12882 1025 aa16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 NEK8Q86SG6 692 aa16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 RBM17Q96I25 401 aaKnown RBP16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 RUFY1Q96T51 708 aa16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 TMEM47Q9BQJ4 181 aa16.76■□□□□ 0.27
UBE2D4-201ENST00000222402 MATR3P43243 847 aaKnown RBP eCLIP16.75■□□□□ 0.27
UBE2D4-201ENST00000222402 KIF5AQ12840 1032 aa16.75■□□□□ 0.27
UBE2D4-201ENST00000222402 NR1I3Q14994 352 aa16.75■□□□□ 0.27
UBE2D4-201ENST00000222402 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
UBE2D4-201ENST00000222402 PRCPP42785 496 aa16.75■□□□□ 0.27
UBE2D4-201ENST00000222402 EVX2Q03828 476 aa16.75■□□□□ 0.27
UBE2D4-201ENST00000222402 EHBP1Q8NDI1 1231 aa16.75■□□□□ 0.27
UBE2D4-201ENST00000222402 FAM237AA0A1B0GTK4 181 aa16.75■□□□□ 0.27
UBE2D4-201ENST00000222402 CALCRLQ16602 461 aa16.75■□□□□ 0.27
UBE2D4-201ENST00000222402 REXO1L1PQ8IX06 675 aa16.75■□□□□ 0.27
UBE2D4-201ENST00000222402 EPN1Q9Y6I3 576 aaPredicted RBP16.75■□□□□ 0.27
UBE2D4-201ENST00000222402 ZNF76P36508 570 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 LMAN1P49257 510 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 GRAPQ13588 217 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 TCP11X2Q5H9J9 407 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 C12orf60Q5U649 245 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 GALNT17Q6IS24 598 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 CNNM4Q6P4Q7 775 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 LEKR1Q6ZMV7 388 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 GRAPLQ8TC17 118 aaPredicted RBP16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 SNX29Q8TEQ0 813 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 TRERF1Q96PN7 1200 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 A0A087X0B3 334 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 IQCEQ6IPM2 695 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 SLC39A2Q9NP94 309 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 LUC7LQ9NQ29 371 aaKnown RBP16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 ABCC6O95255 1503 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 B4DLN1 442 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 PHACTR2O75167 634 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 CLSTN1O94985 981 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 ELOA2Q8IYF1 753 aaPredicted RBP16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 PIGSQ96S52 555 aa16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 ADD3Q9UEY8 706 aaKnown RBP16.74■□□□□ 0.27
UBE2D4-201ENST00000222402 ADGRG1Q9Y653 693 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms