RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 FAM182BQ5T319 152 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 RRAGAQ7L523 313 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 HDXQ7Z353 690 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 FAM76AQ8TAV0 307 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 VPS18Q9P253 973 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 ADD3Q9UEY8 706 aaKnown RBP20.9■□□□□ 0.94
SMPD3-201ENST00000219334 ZMYM6O95789 1325 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 FGAP02671 866 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 CCDC105Q8IYK2 499 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 ZFP91Q96JP5 570 aaPredicted RBP20.9■□□□□ 0.94
SMPD3-201ENST00000219334 SLC12A2P55011 1212 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 INTS8Q75QN2 995 aaKnown RBP20.9■□□□□ 0.94
SMPD3-201ENST00000219334 SESTD1Q86VW0 696 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 CFAP57Q96MR6 1250 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 PRKAG2Q9UGJ0 569 aa20.9■□□□□ 0.94
SMPD3-201ENST00000219334 KIF11P52732 1056 aa20.89■□□□□ 0.94
SMPD3-201ENST00000219334 FYB2Q5VWT5 728 aa20.89■□□□□ 0.94
SMPD3-201ENST00000219334 IFT20Q8IY31 132 aa20.89■□□□□ 0.94
SMPD3-201ENST00000219334 GPKOWQ92917 476 aaPredicted RBP eCLIP20.89■□□□□ 0.94
SMPD3-201ENST00000219334 CCDC94Q9BW85 323 aaPredicted RBP20.89■□□□□ 0.94
SMPD3-201ENST00000219334 TSKSQ9UJT2 592 aa20.89■□□□□ 0.94
SMPD3-201ENST00000219334 PLEKHG1Q9ULL1 1385 aa20.89■□□□□ 0.94
SMPD3-201ENST00000219334 ZWINTO95229 277 aa20.89■□□□□ 0.93
SMPD3-201ENST00000219334 CIAO1O76071 339 aa20.89■□□□□ 0.93
SMPD3-201ENST00000219334 EVCP57679 992 aa20.89■□□□□ 0.93
SMPD3-201ENST00000219334 NBPF11Q86T75 865 aa20.89■□□□□ 0.93
SMPD3-201ENST00000219334 COPRSQ9NQ92 184 aa20.89■□□□□ 0.93
SMPD3-201ENST00000219334 ARMCX3Q9UH62 379 aaPredicted RBP20.89■□□□□ 0.93
SMPD3-201ENST00000219334 BLMP54132 1417 aaPredicted RBP20.89■□□□□ 0.93
SMPD3-201ENST00000219334 PPP2R5CQ13362 524 aa20.89■□□□□ 0.93
SMPD3-201ENST00000219334 TRIM50Q86XT4 487 aa20.89■□□□□ 0.93
SMPD3-201ENST00000219334 GPIHBP1Q8IV16 184 aa20.89■□□□□ 0.93
SMPD3-201ENST00000219334 JPH2Q9BR39 696 aaPredicted RBP20.89■□□□□ 0.93
SMPD3-201ENST00000219334 FEZ2Q9UHY8 353 aaPredicted RBP20.89■□□□□ 0.93
SMPD3-201ENST00000219334 XPOTO43592 962 aaKnown RBP20.88■□□□□ 0.93
SMPD3-201ENST00000219334 MNAT1P51948 309 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 DALRD3Q5D0E6 543 aaKnown RBP20.88■□□□□ 0.93
SMPD3-201ENST00000219334 CROCCP2Q86T23 111 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 ATF5Q9Y2D1 282 aaPredicted RBP20.88■□□□□ 0.93
SMPD3-201ENST00000219334 RIOK3O14730 519 aaKnown RBP20.88■□□□□ 0.93
SMPD3-201ENST00000219334 VIMP08670 466 aaKnown RBP20.88■□□□□ 0.93
SMPD3-201ENST00000219334 SPICE1Q8N0Z3 855 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 LSM14BQ9BX40 385 aaKnown RBP20.88■□□□□ 0.93
SMPD3-201ENST00000219334 PANK4Q9NVE7 773 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 NUB1Q9Y5A7 615 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 GOLGA6CA6NDK9 693 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 GOLGA6BA6NDN3 693 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 GOLGA6DP0CG33 693 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 GOLGA6AQ9NYA3 693 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 MED23Q9ULK4 1368 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 ADGRL2O95490 1459 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 ADD1P35611 737 aaKnown RBP20.88■□□□□ 0.93
SMPD3-201ENST00000219334 ARMCX5Q6P1M9 558 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 ZNF526Q8TF50 670 aaPredicted RBP20.88■□□□□ 0.93
SMPD3-201ENST00000219334 SCYL2Q6P3W7 929 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 ZNF277Q9NRM2 450 aaPredicted RBP20.88■□□□□ 0.93
SMPD3-201ENST00000219334 IMPACTQ9P2X3 320 aa20.88■□□□□ 0.93
SMPD3-201ENST00000219334 ABCC4O15439 1325 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 ASPRV1Q53RT3 343 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 TRMT44Q8IYL2 757 aaKnown RBP20.87■□□□□ 0.93
SMPD3-201ENST00000219334 ATP6V0A1Q93050 837 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 KRT81Q14533 505 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 ME3Q16798 604 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 PDZD4Q76G19 769 aaPredicted RBP20.87■□□□□ 0.93
SMPD3-201ENST00000219334 UNC5CLQ8IV45 518 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 CBX8Q9HC52 389 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 IFRD2Q12894 506 aaPredicted RBP20.87■□□□□ 0.93
SMPD3-201ENST00000219334 HADHQ16836 314 aaKnown RBP20.87■□□□□ 0.93
SMPD3-201ENST00000219334 ERFEQ4G0M1 354 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 ADALQ6DHV7 355 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 U2AF1L4Q8WU68 220 aaKnown RBP20.87■□□□□ 0.93
SMPD3-201ENST00000219334 PPP2R5AQ15172 486 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 SEPT12Q8IYM1 358 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 KANSL2Q9H9L4 492 aa20.87■□□□□ 0.93
SMPD3-201ENST00000219334 ARHGAP6O43182 974 aa20.86■□□□□ 0.93
SMPD3-201ENST00000219334 TTLL1O95922 423 aa20.86■□□□□ 0.93
SMPD3-201ENST00000219334 CUL4BQ13620 913 aa20.86■□□□□ 0.93
SMPD3-201ENST00000219334 CEP170Q5SW79 1584 aa20.86■□□□□ 0.93
SMPD3-201ENST00000219334 RAD17O75943 681 aa20.86■□□□□ 0.93
SMPD3-201ENST00000219334 BSPRYQ5W0U4 402 aa20.86■□□□□ 0.93
SMPD3-201ENST00000219334 PRPF31Q8WWY3 499 aaKnown RBP20.86■□□□□ 0.93
SMPD3-201ENST00000219334 GPR108Q9NPR9 543 aa20.86■□□□□ 0.93
SMPD3-201ENST00000219334 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.86■□□□□ 0.93
SMPD3-201ENST00000219334 ATP10DQ9P241 1426 aa20.86■□□□□ 0.93
SMPD3-201ENST00000219334 DLATP10515 647 aaKnown RBP20.86■□□□□ 0.93
SMPD3-201ENST00000219334 TYW1BQ6NUM6 668 aa20.86■□□□□ 0.93
SMPD3-201ENST00000219334 PUS3Q9BZE2 481 aaKnown RBP20.86■□□□□ 0.93
SMPD3-201ENST00000219334 PNOCQ13519 176 aa20.86■□□□□ 0.93
SMPD3-201ENST00000219334 KLHL7Q8IXQ5 586 aa20.86■□□□□ 0.93
SMPD3-201ENST00000219334 AOC3Q16853 763 aa20.85■□□□□ 0.93
SMPD3-201ENST00000219334 GBP6Q6ZN66 633 aa20.85■□□□□ 0.93
SMPD3-201ENST00000219334 FAM135BQ49AJ0 1406 aa20.85■□□□□ 0.93
SMPD3-201ENST00000219334 TLR3O15455 904 aaKnown RBP20.85■□□□□ 0.93
SMPD3-201ENST00000219334 PFKFB2O60825 505 aa20.85■□□□□ 0.93
SMPD3-201ENST00000219334 METTL14Q9HCE5 456 aaKnown RBP20.85■□□□□ 0.93
SMPD3-201ENST00000219334 ABT1Q9ULW3 272 aaKnown RBP20.85■□□□□ 0.93
SMPD3-201ENST00000219334 STAM2O75886 525 aa20.85■□□□□ 0.93
SMPD3-201ENST00000219334 SARNPP82979 210 aaKnown RBP20.85■□□□□ 0.93
SMPD3-201ENST00000219334 CFAP221Q4G0U5 840 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms