RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 MAD2L2Q9UI95 211 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 KLRF2D3W0D1 207 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 DHX16O60231 1041 aaKnown RBP23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 TRPA1O75762 1119 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 CRHR2Q13324 411 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 BTNL9Q6UXG8 535 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 LBX2Q6XYB7 198 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 JMYQ8N9B5 988 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 CFHR5Q9BXR6 569 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 FBXO28Q9NVF7 368 aa23.5■■□□□ 1.35
RHBDD3-201ENST00000216085 PALM3A6NDB9 673 aaPredicted RBP23.49■■□□□ 1.35
RHBDD3-201ENST00000216085 SPDYE16A6NNV3 312 aaPredicted RBP23.49■■□□□ 1.35
RHBDD3-201ENST00000216085 TLR2O60603 784 aa23.49■■□□□ 1.35
RHBDD3-201ENST00000216085 RXRAP19793 462 aa23.49■■□□□ 1.35
RHBDD3-201ENST00000216085 SYDE2Q5VT97 1194 aa23.49■■□□□ 1.35
RHBDD3-201ENST00000216085 CCDC144CPQ8IYA2 1237 aa23.49■■□□□ 1.35
RHBDD3-201ENST00000216085 ZBED4O75132 1171 aa23.48■■□□□ 1.35
RHBDD3-201ENST00000216085 MCM2P49736 904 aa23.48■■□□□ 1.35
RHBDD3-201ENST00000216085 RAB11FIP4Q86YS3 637 aa23.48■■□□□ 1.35
RHBDD3-201ENST00000216085 NOL8Q76FK4 1167 aaKnown RBP23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 ATG4CQ96DT6 458 aa23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 WBP1LQ9NX94 342 aa23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 PRR12Q9ULL5 1215 aa23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 NID2Q14112 1375 aa23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 PDIA3P30101 505 aaKnown RBP23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 SLC16A2P36021 539 aa23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 TTBK2Q6IQ55 1244 aa23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 STAG2Q8N3U4 1231 aa23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 SLKQ9H2G2 1235 aaPredicted RBP23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 LIMCH1Q9UPQ0 1083 aa23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 RABGAP1Q9Y3P9 1069 aa23.47■■□□□ 1.35
RHBDD3-201ENST00000216085 VWA5AO00534 786 aa23.46■■□□□ 1.35
RHBDD3-201ENST00000216085 CPLX2Q6PUV4 134 aaKnown RBP23.46■■□□□ 1.35
RHBDD3-201ENST00000216085 PAGR1Q9BTK6 254 aa23.46■■□□□ 1.35
RHBDD3-201ENST00000216085 PNMA2Q9UL42 364 aa23.46■■□□□ 1.35
RHBDD3-201ENST00000216085 PCNTO95613 3336 aa23.46■■□□□ 1.35
RHBDD3-201ENST00000216085 SMARCA1P28370 1054 aa23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 FAM110CQ1W6H9 321 aa23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 ZSCAN31Q96LW9 406 aaPredicted RBP23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 LARP6Q9BRS8 491 aaKnown RBP23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 UBA5Q9GZZ9 404 aa23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 TPCN1Q9ULQ1 816 aa23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 CPLX1O14810 134 aa23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 TBC1D8O95759 1140 aa23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 CCNA1P78396 465 aa23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 PARP14Q460N5 1801 aa23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 TMTC3Q6ZXV5 915 aa23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 ADAMTS5Q9UNA0 930 aa23.45■■□□□ 1.34
RHBDD3-201ENST00000216085 ADGRA2Q96PE1 1338 aa23.44■■□□□ 1.34
RHBDD3-201ENST00000216085 OAZ1P54368 228 aa23.44■■□□□ 1.34
RHBDD3-201ENST00000216085 STK3Q13188 491 aa23.44■■□□□ 1.34
RHBDD3-201ENST00000216085 ADGRF4Q8IZF3 695 aa23.44■■□□□ 1.34
RHBDD3-201ENST00000216085 ANKRD13CQ8N6S4 541 aa23.44■■□□□ 1.34
RHBDD3-201ENST00000216085 GPRC5AQ8NFJ5 357 aa23.44■■□□□ 1.34
RHBDD3-201ENST00000216085 SPZ1Q9BXG8 430 aa23.44■■□□□ 1.34
RHBDD3-201ENST00000216085 SLC38A10Q9HBR0 1119 aa23.44■■□□□ 1.34
RHBDD3-201ENST00000216085 SH2B1Q9NRF2 756 aaPredicted RBP23.44■■□□□ 1.34
RHBDD3-201ENST00000216085 CPA4Q9UI42 421 aa23.44■■□□□ 1.34
RHBDD3-201ENST00000216085 HPS5Q9UPZ3 1129 aa23.44■■□□□ 1.34
RHBDD3-201ENST00000216085 PLS1Q14651 629 aa23.43■■□□□ 1.34
RHBDD3-201ENST00000216085 CCAR1Q8IX12 1150 aaKnown RBP23.43■■□□□ 1.34
RHBDD3-201ENST00000216085 MORF4L1Q9UBU8 362 aa23.43■■□□□ 1.34
RHBDD3-201ENST00000216085 SEC63Q9UGP8 760 aaKnown RBP23.43■■□□□ 1.34
RHBDD3-201ENST00000216085 A0A0G2JMZ2 1700 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 ERVK-9P63128 1117 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 ERVK-24P63145 666 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 CCT2P78371 535 aaKnown RBP23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 C17orf99Q6UX52 265 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 RANBP17Q9H2T7 1088 aaKnown RBP23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 VAT1LQ9HCJ6 419 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 RLFQ13129 1914 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 PFKFB2O60825 505 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 CDKL5O76039 1030 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 PLEKHA8P1O95397 391 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 COPB2P35606 906 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 TRAF1Q13077 416 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 RRP36Q96EU6 259 aaKnown RBP23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 TEX13BQ9BXU2 312 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 CPVLQ9H3G5 476 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 RIOX1Q9H6W3 641 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 RBPJLQ9UBG7 517 aa23.42■■□□□ 1.34
RHBDD3-201ENST00000216085 BCRP11274 1271 aa23.41■■□□□ 1.34
RHBDD3-201ENST00000216085 CDC37Q16543 378 aaPredicted RBP23.41■■□□□ 1.34
RHBDD3-201ENST00000216085 NOM1Q5C9Z4 860 aaKnown RBP23.41■■□□□ 1.34
RHBDD3-201ENST00000216085 CWC22Q9HCG8 908 aaKnown RBP23.41■■□□□ 1.34
RHBDD3-201ENST00000216085 RBM27Q9P2N5 1060 aaKnown RBP23.41■■□□□ 1.34
RHBDD3-201ENST00000216085 ATP2A1O14983 1001 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 CDC27P30260 824 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 AKAP17AQ02040 695 aaKnown RBP23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 KIF22Q14807 665 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 ME3Q16798 604 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 CPXCR1Q8N123 301 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 SPATC1LQ9H0A9 340 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 JMJD4Q9H9V9 463 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 ADD1P35611 737 aaKnown RBP23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 TMEM132BQ14DG7 1078 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 CCDC174Q6PII3 467 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 HOMER1Q86YM7 354 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 CCDC82Q8N4S0 544 aa23.4■■□□□ 1.34
RHBDD3-201ENST00000216085 SRBD1Q8N5C6 995 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms