RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Prpf3Q922U1 683 aaKnown RBP35.22■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Dnaaf5B9EJR8 853 aa35.21■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Itgb7P26011 806 aa35.21■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 GclcP97494 637 aa35.21■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Entpd3Q8BFW6 529 aa35.21■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 IrgqQ8VIM9 583 aa35.21■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 AllcQ9JHX6 414 aa35.21■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Azi2Q9QYP6 405 aa35.21■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Ifi202Q9R002 445 aa35.21■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Kifap3P70188 793 aa35.21■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Slitrk3Q810B9 980 aa35.21■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Stk39Q9Z1W9 556 aa35.21■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Scn3aA2ASI5 1947 aa35.2■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Zscan20B2KFW1 1030 aa35.2■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Acsl1P41216 699 aa35.2■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Limch1Q3UH68 1057 aa35.2■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Arhgef2Q60875 985 aa35.2■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Ubiad1Q9DC60 336 aa35.2■■■■□ 3.23
Ctdnep1-201ENSMUST00000108593 Smarcc2Q6PDG5 1213 aa35.19■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Pgrmc2Q80UU9 217 aaKnown RBP35.19■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Gm15448F6PZL4 682 aa35.18■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Cdan1Q8CC12 1239 aa35.18■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Atp11aP98197 1187 aa35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Churc1Q6DG52 112 aa35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Elp3Q9CZX0 547 aa35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Psmd10Q9Z2X2 231 aa35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Sall1Q9ER74 1322 aa35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Ddit3P35639 168 aa35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Map4k1P70218 827 aa35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Mrgprb1Q3UG61 350 aa35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Rhpn1Q61085 643 aa35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Gimap3Q99MI6 301 aa35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Ripk3Q9QZL0 486 aa35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 IkQ9Z1M8 557 aaKnown RBP35.17■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 CatspereP0DP43 985 aa35.16■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 MycbpapQ5SUV2 932 aa35.16■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Brd2Q7JJ13 798 aaKnown RBP35.16■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 CerkQ8K4Q7 531 aa35.16■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Pfkfb3A7UAK5 555 aa35.15■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Rfx1P48377 963 aa35.15■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 U2af1l4Q8BGJ9 220 aa35.15■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Lrrc2Q8VDB8 371 aa35.15■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Katnbl1Q9CWJ3 299 aa35.15■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 PatjQ63ZW7 1834 aa35.15■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Gjd2O54851 321 aa35.14■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Stat3P42227 770 aaKnown RBP35.14■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Nap1l2P51860 460 aa35.14■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Morf4l1P60762 362 aa35.14■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Gdf10P97737 476 aa35.14■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Fbxo11Q7TPD1 930 aaKnown RBP35.14■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Celf5D3Z4T1 395 aaKnown RBP35.14■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 RadxQ8C779 850 aa35.14■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 Slc5a5Q99PN0 618 aa35.14■■■■□ 3.22
Ctdnep1-201ENSMUST00000108593 MthfslL7N466 203 aa35.13■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Ppp1r1bQ60829 194 aa35.13■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Onecut3Q8K557 490 aa35.13■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Znhit2Q9QY66 399 aa35.13■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Syt5Q9R0N5 386 aa35.13■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Rad51bO35719 350 aa35.12■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Rgs9O54828 675 aa35.12■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Btg1-ps1Q3V0S2 161 aa35.12■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Btg1-ps2Q3V0X0 161 aa35.12■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Vps37dQ810I0 261 aa35.12■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Smc3Q9CW03 1217 aaKnown RBP35.12■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Cd2apQ9JLQ0 637 aa35.12■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Tob2Q9JM55 345 aa35.12■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Oxr1Q4KMM3 866 aa35.11■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Fbxo33Q8VE08 562 aa35.11■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Trim59Q922Y2 403 aa35.11■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Igsf9bE9PZ19 1328 aa35.11■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Dnajb6O54946 365 aa35.1■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Lig1P37913 916 aa35.1■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Gm10392Q3V3I3 114 aa35.1■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Dnai1Q8C0M8 701 aa35.1■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Mknk2Q8CDB0 459 aa35.1■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Wasf1Q8R5H6 559 aa35.1■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 OgdhlE9Q7L0 1029 aa35.1■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Kcna1P16388 495 aa35.1■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 1700123L14RikQ3V2K7 440 aa35.1■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Tmem191cQ9JJB1 302 aa35.1■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Pabpc1lA2A5N3 607 aaKnown RBP35.09■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Ankrd35E9Q9D8 996 aa35.09■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Pla2g6P97819 807 aa35.09■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Galntl5Q9D4M9 431 aa35.09■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Terf2O35144 541 aa35.08■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Taok2Q6ZQ29 1240 aa35.08■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Gripap1Q8VD04 806 aa35.08■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Fam71e1A1L3C1 212 aa35.07■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Zbtb21E9Q444 1094 aa35.07■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 Podxl2Q8CAE9 603 aa35.07■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 TbcbQ9D1E6 244 aa35.07■■■■□ 3.21
Ctdnep1-201ENSMUST00000108593 C87977A2A958 498 aa35.06■■■■□ 3.2
Ctdnep1-201ENSMUST00000108593 PRAG1Q571I4 1179 aa35.06■■■■□ 3.2
Ctdnep1-201ENSMUST00000108593 Adgra1Q8C4G9 578 aa35.06■■■■□ 3.2
Ctdnep1-201ENSMUST00000108593 Ttc8Q8VD72 515 aa35.06■■■■□ 3.2
Ctdnep1-201ENSMUST00000108593 Cep57l1Q8VDS7 400 aa35.06■■■■□ 3.2
Ctdnep1-201ENSMUST00000108593 RragcQ99K70 398 aa35.06■■■■□ 3.2
Ctdnep1-201ENSMUST00000108593 Mrpl44Q9CY73 333 aaKnown RBP35.06■■■■□ 3.2
Ctdnep1-201ENSMUST00000108593 Me3Q8BMF3 604 aa35.06■■■■□ 3.2
Ctdnep1-201ENSMUST00000108593 E4f1Q8CCE9 783 aa35.06■■■■□ 3.2
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms