RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Dkk3Q9QUN9 349 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Gm28897A0A087WP44 222 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Gbp1Q01514 589 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Brsk2Q69Z98 735 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 N4bp3Q8C7U1 537 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 OscarQ8VBT3 265 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 NgrnQ99KS2 293 aaKnown RBP9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ndufb9Q9CQJ8 179 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Slc5a4aQ9ET37 656 aa9.86□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ccdc6D3YZP9 469 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ces1hD3Z298 562 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Akr1b7P21300 316 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Tlx1P43345 332 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Mcm4P49717 862 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Arhgap30Q640N3 1101 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Krt39Q6IFX4 482 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Fbxo10Q7TQF2 950 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Epb41l5Q8BGS1 731 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 1700016D06RikQ9DAA5 166 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Mlh1Q9JK91 760 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Prrt4B2RU40 902 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Rad17Q6NXW6 688 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ccdc85bQ6PDY0 202 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cpa1Q7TPZ8 419 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Polr3cQ9D483 533 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 EgfrQ01279 1210 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Zbtb7bQ64321 544 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Sestd1Q80UK0 696 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Polr3dQ91WD1 398 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 FscbA1EGX6 1074 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Obp2bA2BHR0 176 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 OgdhlE9Q7L0 1029 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Smad7O35253 426 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Eif6O55135 245 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 NxnP97346 435 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 ItpripQ3TNL8 555 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ddhd2Q80Y98 699 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Hpcal4Q8BGZ1 191 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Rint1Q8BZ36 792 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 ClmnQ8C5W0 1052 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Pias4Q9JM05 507 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Kif16bB1AVY7 1312 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Izumo3A6PWV3 263 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Card11Q8CIS0 1159 aa9.85□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Fam166bA2AIP0 273 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 R3hdm1E9Q9Q2 1135 aaKnown RBP9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ccpg1Q640L3 753 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Znf365Q8BG89 408 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Bst2Q8R2Q8 172 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ssx2ipQ8VC66 615 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 CarsQ9ER72 831 aaKnown RBP9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Kif9Q9WV04 790 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 CtcflA2APF3 636 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Krt35Q497I4 455 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Sez6lQ6P1D5 963 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Arf2Q8BSL7 181 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 HibchQ8QZS1 385 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Spdl1Q923A2 608 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Mdm1Q9D067 708 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Capn12Q9ER56 720 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Tuba8Q9JJZ2 449 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Klhl18A0A0G2JGN5 579 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 PrlP06879 226 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Zfp42P22227 288 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Tdo2P48776 406 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Psd3Q2PFD7 1037 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Slc10a4Q3UEZ8 437 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Sptlc3Q8BG54 563 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Clec4aQ9QZ15 238 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 SarsP26638 512 aaKnown RBP9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Stip1Q60864 543 aaKnown RBP9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Vps72Q62481 368 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Q6PD19 689 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Taf5Q8C092 801 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Prelid1Q8R107 217 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cog4Q8R1U1 785 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Abcg4Q91WA9 646 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Tsc22d4Q9EQN3 387 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cpsf3Q9QXK7 684 aa9.84□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Hsd3b2P26149 373 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 AmhP27106 555 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Kmt5aQ2YDW7 349 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 HadhaQ8BMS1 763 aaKnown RBP9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ttc12Q8BW49 704 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Eef1gQ9D8N0 437 aaKnown RBP9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Thap11Q9JJD0 305 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Arhgef26D3YYY8 869 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 HadhQ61425 314 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ehd2Q8BH64 543 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ggps1Q9WTN0 300 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 SufuQ9Z0P7 484 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Sept3Q9Z1S5 350 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Prdm11A2AGX3 565 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Tcerg1lQ3B807 590 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ccndbp1Q3TVC7 356 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Nr6a1Q64249 495 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Carns1Q6ZPS2 827 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ankrd23Q812A3 306 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Klhl31Q8BWA5 634 aa9.83□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Mta1Q8K4B0 715 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 65.9 ms