RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Smarcad1Q04692 1021 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Kdm5aQ3UXZ9 1690 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Champ1Q8K327 802 aaKnown RBP11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Zkscan3Q91VW9 553 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Bin2D3Z6Q9 489 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Tuft1O08970 390 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gucy1b3O54865 620 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cops6O88545 324 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rnf168Q80XJ2 565 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Csgalnact2Q8C1F4 542 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 1700020D05RikQ99PB1 294 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Irs4Q9Z0Y7 1216 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cul7Q8VE73 1689 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Aox4Q3TYQ9 1336 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Mx1P09922 631 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Adssl1P28650 457 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rnf216P58283 853 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cep57Q8CEE0 500 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rbm41Q8JZV4 413 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Usp15Q8R5H1 981 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cbwd1Q8VEH6 393 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Maml3D4QGC2 1135 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Snx12O70493 165 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Aggf1Q7TN31 711 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Bola2Q8BGS2 86 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Hpcal4Q8BGZ1 191 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 InsrrQ9WTL4 1300 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Actn4P57780 912 aaKnown RBP11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Exoc5Q3TPX4 708 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Nxf7Q80SZ6 620 aaKnown RBP11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 L3mbtl3Q8BLB7 883 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Slc8a3S4R2P9 928 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Slc44a1Q6X893 653 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Trim17Q7TPM3 477 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Abhd8Q8R0P8 439 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Glrx3Q9CQM9 337 aa11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cd2bp2Q9CWK3 342 aaKnown RBP11.12□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Speer4f2E9Q366 295 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gdap1O88741 358 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Chmp6P0C0A3 200 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ica1lQ3TY65 431 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Stkld1Q80YS9 662 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Clic6Q8BHB9 596 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Arid5bQ8BM75 1188 aaKnown RBP11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Daam1Q8BPM0 1077 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Dnajc10Q9DC23 793 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Zfp174B9EJW5 407 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Adcy8P97490 1249 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Lins1Q3U1D0 764 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Itga6Q61739 1091 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rrp1bQ91YK2 724 aaKnown RBP11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Slc13a1Q9JHI4 594 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rilpl1Q9JJC6 406 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Usp42B2RQC2 1324 aaKnown RBP11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Apol8A2VDH7 339 aaKnown RBP11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Q8BWG4 1187 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Q8VDP2 222 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Epb41l3Q9WV92 929 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Clcn6O35454 870 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Trim21Q62191 470 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Vps37bQ8R0J7 285 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Uggt2E9Q4X2 1504 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Abcc2Q8VI47 1543 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 GnpatP98192 678 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rhpn1Q61085 643 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Myl6bQ8CI43 207 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Slc35f6Q8VE96 372 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Drc3Q9D5E4 523 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Abca5Q8K448 1642 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Wfs1P56695 890 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rtel1Q0VGM9 1203 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ccdc33Q3ULW6 985 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Jarid2Q62315 1234 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 CgasQ8C6L5 507 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Spc24Q9D083 201 aa11.11□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Atf2P16951 487 aaKnown RBP11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ric8aQ3TIR3 530 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Map3k7Q62073 579 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Prkab2Q6PAM0 271 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ccdc68Q8BVC4 333 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Pck1Q9Z2V4 622 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Nova2D3YVV7 556 aaKnown RBP11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Zfp94E9Q6Y4 486 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Nrg3O35181 713 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Krt19P19001 403 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Xrcc6P23475 608 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cage1Q5IR70 849 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Cacna2d2Q6PHS9 1154 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Tmem119Q8R138 280 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Gimap7Q8R379 293 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Rabep2Q91WG2 554 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Disp1Q3TDN0 1521 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Otud7bB2RUR8 840 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Palb2Q3U0P1 1104 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Igflr1Q3U4N7 345 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Adora1Q60612 326 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Ddx3yQ62095 658 aaKnown RBP11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Slc7a6osQ7TPE5 306 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 Myl7Q9QVP4 175 aa11.1□□□□□ -0.63
Ubr1-201ENSMUST00000028728 CaluO35887 315 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms