RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, human

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-238	ENST00000640859	FZD9	O00144	591 aa		12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	SYK	P43405	635 aa		12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	FKBP1A	P62942	108 aa	Known RBP	12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	GABPA	Q06546	454 aa		12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	EARS2	Q5JPH6	523 aa	Known RBP	12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	CHRDL2	Q6WN34	429 aa		12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	C11orf57	Q6ZUT1	292 aa	Predicted RBP	12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	ZNF579	Q8NAF0	562 aa	Known RBP	12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	MRI	Q9BWK5	157 aa		12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	KIAA1468	Q9P260	1216 aa		12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	MAD2L2	Q9UI95	211 aa		12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	TTF2	Q9UNY4	1162 aa	Known RBP	12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	PCDHB6	Q9Y5E3	794 aa		12.92	□□□□□ -0.34
GFAP-238	ENST00000640859	MYO3B	Q8WXR4	1341 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	FAM205C	A6NFA0	338 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	TRIM75P	A6NK02	468 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859		F8W031	263 aa	Predicted RBP	12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	VEGFA	P15692	232 aa	Predicted RBP	12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	SLC35G1	Q2M3R5	365 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	ELOA2	Q8IYF1	753 aa	Predicted RBP	12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	STAG2	Q8N3U4	1231 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	LZTS2	Q9BRK4	669 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	BRMS1	Q9HCU9	246 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	SH3GLB2	Q9NR46	395 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	USP40	Q9NVE5	1235 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	CEP131	Q9UPN4	1083 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	ZKSCAN5	Q9Y2L8	839 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	SRPRB	Q9Y5M8	271 aa	Known RBP	12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	ADAMTSL1	Q8N6G6	1762 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	PLIN4	Q96Q06	1357 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	FER1L6	Q2WGJ9	1857 aa		12.91	□□□□□ -0.34
GFAP-238	ENST00000640859	RAD17	O75943	681 aa		12.9	□□□□□ -0.34
GFAP-238	ENST00000640859	PTMA	P06454	111 aa	Known RBP	12.9	□□□□□ -0.34
GFAP-238	ENST00000640859	RPS12	P25398	132 aa	Known RBP	12.9	□□□□□ -0.34
GFAP-238	ENST00000640859	GRIN1	Q05586	938 aa		12.9	□□□□□ -0.34
GFAP-238	ENST00000640859	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.9	□□□□□ -0.34
GFAP-238	ENST00000640859	CDC42EP5	Q6NZY7	148 aa		12.9	□□□□□ -0.34
GFAP-238	ENST00000640859	OGFOD1	Q8N543	542 aa		12.9	□□□□□ -0.34
GFAP-238	ENST00000640859	ZNF526	Q8TF50	670 aa	Predicted RBP	12.9	□□□□□ -0.34
GFAP-238	ENST00000640859	DDX4	Q9NQI0	724 aa	Known RBP	12.9	□□□□□ -0.34
GFAP-238	ENST00000640859	SCN9A	Q15858	1988 aa		12.9	□□□□□ -0.34
GFAP-238	ENST00000640859	MYH8	P13535	1937 aa		12.9	□□□□□ -0.35
GFAP-238	ENST00000640859	IGKV6D-41	A0A0C4DH26	115 aa		12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	BMP15	O95972	392 aa		12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	TOP1	P11387	765 aa	Known RBP	12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	MMP14	P50281	582 aa		12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	SCNN1D	P51172	638 aa		12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	NLRP12	P59046	1061 aa		12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	NLRP5	P59047	1200 aa		12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	HDLBP	Q00341	1268 aa	Known RBP	12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	NOM1	Q5C9Z4	860 aa	Known RBP	12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	STRIP1	Q5VSL9	837 aa		12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	DHX40	Q8IX18	779 aa	Known RBP	12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	FAM177A1	Q8N128	213 aa	Predicted RBP	12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	ERCC4	Q92889	916 aa	Predicted RBP	12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	TEKT1	Q969V4	418 aa		12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	KCNQ5	Q9NR82	932 aa		12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	TUBE1	Q9UJT0	475 aa		12.89	□□□□□ -0.35
GFAP-238	ENST00000640859	KCNH3	Q9ULD8	1083 aa		12.89	□□□□□ -0.35
GFAP-238	ENST00000640859		A0A087WWV3	80 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859		H7C1D1	291 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	ADAMTS3	O15072	1205 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	CYTH3	O43739	400 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	ZNF500	O60304	480 aa	Predicted RBP	12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	ATP2B1	P20020	1258 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	CALML3	P27482	149 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	SMARCA1	P28370	1054 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	CRK	P46108	304 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	TRAPPC10	P48553	1259 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	FXR2	P51116	673 aa	Known RBP eCLIP	12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	ZNF75D	P51815	510 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	PLCB2	Q00722	1185 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	CXCL9	Q07325	125 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	PICALM	Q13492	652 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	TTC38	Q5R3I4	469 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	DACT2	Q5SW24	774 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	SARM1	Q6SZW1	724 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	KRBA2	Q6ZNG9	492 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	PLA2G4D	Q86XP0	818 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	CEP57L1	Q8IYX8	460 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	DAGLB	Q8NCG7	672 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	CEP95	Q96GE4	821 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	ZDHHC15	Q96MV8	337 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	BPIFA3	Q9BQP9	254 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	SPZ1	Q9BXG8	430 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	FAM13B	Q9NYF5	915 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	HDAC9	Q9UKV0	1011 aa		12.88	□□□□□ -0.35
GFAP-238	ENST00000640859	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.87	□□□□□ -0.35
GFAP-238	ENST00000640859		M0R2N6	131 aa		12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	WNT7A	O00755	349 aa		12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	DDN	O94850	711 aa	Predicted RBP	12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	MSN	P26038	577 aa	Known RBP	12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	MDM2	Q00987	491 aa	Predicted RBP	12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	LONRF3	Q496Y0	759 aa		12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	PNMA8A	Q86V59	439 aa	Predicted RBP	12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	BLID	Q8IZY5	108 aa		12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	AGBL3	Q8NEM8	1001 aa		12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	PIBF1	Q8WXW3	757 aa		12.87	□□□□□ -0.35
GFAP-238	ENST00000640859	NAT10	Q9H0A0	1025 aa	Known RBP	12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms