RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 PARD6BQ9BYG5 372 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 FAM205AQ6ZU69 1335 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 BMP15O95972 392 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 SF3B3Q15393 1217 aaKnown RBP15.79■□□□□ 0.12
SPIN3-239ENST00000640463 ZNF569Q5MCW4 686 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 RSRC2Q7L4I2 434 aaKnown RBP15.79■□□□□ 0.12
SPIN3-239ENST00000640463 A0A1B0GUL6 1792 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 TBC1D9BQ66K14 1250 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 CC2D1AQ6P1N0 951 aaPredicted RBP15.79■□□□□ 0.12
SPIN3-239ENST00000640463 TXNRD3Q86VQ6 643 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 STAG2Q8N3U4 1231 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 LINC00116Q8NCU8 138 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 CTAGE1Q96RT6 745 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 MCM9Q9NXL9 1143 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 SPATA31A1Q5TZJ5 1347 aa15.78■□□□□ 0.12
SPIN3-239ENST00000640463 PFKFB3Q16875 520 aaPredicted RBP15.78■□□□□ 0.12
SPIN3-239ENST00000640463 FBXO33Q7Z6M2 555 aa15.78■□□□□ 0.12
SPIN3-239ENST00000640463 NELFBQ8WX92 580 aa15.78■□□□□ 0.12
SPIN3-239ENST00000640463 CRNKL1Q9BZJ0 848 aaKnown RBP15.78■□□□□ 0.12
SPIN3-239ENST00000640463 ZCCHC17Q9NP64 241 aaKnown RBP15.78■□□□□ 0.12
SPIN3-239ENST00000640463 PP2D1A8MPX8 630 aa15.78■□□□□ 0.12
SPIN3-239ENST00000640463 TBC1D8O95759 1140 aa15.78■□□□□ 0.12
SPIN3-239ENST00000640463 GPR161Q8N6U8 529 aaKnown RBP15.78■□□□□ 0.12
SPIN3-239ENST00000640463 COL16A1Q07092 1604 aaPredicted RBP15.78■□□□□ 0.12
SPIN3-239ENST00000640463 TRIM49BA6NDI0 452 aa15.77■□□□□ 0.12
SPIN3-239ENST00000640463 HIBADHP31937 336 aaKnown RBP15.77■□□□□ 0.12
SPIN3-239ENST00000640463 ERVK-24P63145 666 aa15.77■□□□□ 0.12
SPIN3-239ENST00000640463 RCSD1Q6JBY9 416 aa15.77■□□□□ 0.12
SPIN3-239ENST00000640463 DYNLL2Q96FJ2 89 aa15.77■□□□□ 0.12
SPIN3-239ENST00000640463 NUP88Q99567 741 aaPredicted RBP15.77■□□□□ 0.12
SPIN3-239ENST00000640463 ORC4O43929 436 aa15.77■□□□□ 0.11
SPIN3-239ENST00000640463 KIF5CO60282 957 aa15.77■□□□□ 0.11
SPIN3-239ENST00000640463 TPM1P09493 284 aa15.77■□□□□ 0.11
SPIN3-239ENST00000640463 GOLGA1Q92805 767 aa15.77■□□□□ 0.11
SPIN3-239ENST00000640463 LAMB2P55268 1798 aa15.77■□□□□ 0.11
SPIN3-239ENST00000640463 COPB1P53618 953 aaKnown RBP15.77■□□□□ 0.11
SPIN3-239ENST00000640463 TFAP4Q01664 338 aa15.77■□□□□ 0.11
SPIN3-239ENST00000640463 PAK1Q13153 545 aa15.77■□□□□ 0.11
SPIN3-239ENST00000640463 CT47A1Q5JQC4 288 aaPredicted RBP15.77■□□□□ 0.11
SPIN3-239ENST00000640463 TYW1BQ6NUM6 668 aa15.77■□□□□ 0.11
SPIN3-239ENST00000640463 GTPBP6O43824 516 aaPredicted RBP15.76■□□□□ 0.11
SPIN3-239ENST00000640463 RPN1P04843 607 aaKnown RBP15.76■□□□□ 0.11
SPIN3-239ENST00000640463 PRCPP42785 496 aa15.76■□□□□ 0.11
SPIN3-239ENST00000640463 RPS8P62241 208 aaKnown RBP15.76■□□□□ 0.11
SPIN3-239ENST00000640463 RASGRP2Q7LDG7 609 aa15.76■□□□□ 0.11
SPIN3-239ENST00000640463 NAA15Q9BXJ9 866 aaKnown RBP15.76■□□□□ 0.11
SPIN3-239ENST00000640463 SRP68Q9UHB9 627 aaKnown RBP15.76■□□□□ 0.11
SPIN3-239ENST00000640463 NUTM2BA6NNL0 878 aaPredicted RBP15.76■□□□□ 0.11
SPIN3-239ENST00000640463 NUTM2EB1AL46 878 aaPredicted RBP15.76■□□□□ 0.11
SPIN3-239ENST00000640463 KCNJ18B7U540 433 aa15.76■□□□□ 0.11
SPIN3-239ENST00000640463 KCNJ12Q14500 433 aa15.76■□□□□ 0.11
SPIN3-239ENST00000640463 KIF4BQ2VIQ3 1234 aa15.76■□□□□ 0.11
SPIN3-239ENST00000640463 CNGA4Q8IV77 575 aa15.76■□□□□ 0.11
SPIN3-239ENST00000640463 SLC35F6Q8N357 371 aa15.76■□□□□ 0.11
SPIN3-239ENST00000640463 RASSF8Q8NHQ8 419 aa15.76■□□□□ 0.11
SPIN3-239ENST00000640463 EEF2KMTQ96G04 330 aa15.76■□□□□ 0.11
SPIN3-239ENST00000640463 DLEC1Q9Y238 1755 aa15.76■□□□□ 0.11
SPIN3-239ENST00000640463 PES1O00541 588 aaKnown RBP15.75■□□□□ 0.11
SPIN3-239ENST00000640463 PCP11498 1178 aaKnown RBP15.75■□□□□ 0.11
SPIN3-239ENST00000640463 STAT6P42226 847 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 TCP11X2Q5H9J9 407 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 BLIDQ8IZY5 108 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 RABGGTAQ92696 567 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 SLF1Q9BQI6 1058 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 KAT14Q9H8E8 782 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 IL17RBQ9NRM6 502 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 LIMA1Q9UHB6 759 aaKnown RBP15.75■□□□□ 0.11
SPIN3-239ENST00000640463 RWDD2AQ9UIY3 292 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 USP17L3A6NCW0 530 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 USP17L4A6NCW7 530 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 SEMA3EO15041 775 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 CHMP4BP1P59074 171 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 CLEC4GQ6UXB4 293 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 PTF1AQ7RTS3 328 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 USP17L1Q7RTZ2 530 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 C4orf32Q8N8J7 132 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 ABHD10Q9NUJ1 306 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 SCN7AQ01118 1682 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 WNK3Q9BYP7 1800 aa15.75■□□□□ 0.11
SPIN3-239ENST00000640463 UBXN1Q04323 297 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 ZNF658Q5TYW1 1059 aaPredicted RBP15.74■□□□□ 0.11
SPIN3-239ENST00000640463 CHP1Q99653 195 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 TMEM60Q9H2L4 133 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 CPVLQ9H3G5 476 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 ARFGAP3Q9NP61 516 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 ATP8A2Q9NTI2 1148 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 CASZ1Q86V15 1759 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 PMS1P54277 932 aaKnown RBP15.74■□□□□ 0.11
SPIN3-239ENST00000640463 PNMA1Q8ND90 353 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 KRT9P35527 623 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 TXLNAP40222 546 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 SRGAP1Q7Z6B7 1085 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 DZIP1Q86YF9 867 aaKnown RBP15.74■□□□□ 0.11
SPIN3-239ENST00000640463 SLC44A5Q8NCS7 719 aa15.74■□□□□ 0.11
SPIN3-239ENST00000640463 CDCA7Q9BWT1 371 aaPredicted RBP15.74■□□□□ 0.11
SPIN3-239ENST00000640463 ARPP21Q9UBL0 812 aaPredicted RBP15.74■□□□□ 0.11
SPIN3-239ENST00000640463 OAS2P29728 719 aaKnown RBP15.73■□□□□ 0.11
SPIN3-239ENST00000640463 TRAPPC10P48553 1259 aa15.73■□□□□ 0.11
SPIN3-239ENST00000640463 INF2Q27J81 1249 aa15.73■□□□□ 0.11
SPIN3-239ENST00000640463 TRIM10Q9UDY6 481 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms