RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 COL22A1Q8NFW1 1626 aaPredicted RBP13.61□□□□□ -0.23
GFAP-228ENST00000638488 FGAP02671 866 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 RWDD2BP57060 319 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 IMMTQ16891 758 aaKnown RBP13.6□□□□□ -0.23
GFAP-228ENST00000638488 BRAPQ7Z569 592 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 CCDC13Q8IYE1 715 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 VGLL2Q8N8G2 317 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 RUBCNQ92622 972 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 CCDC51Q96ER9 411 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 C8orf37Q96NL8 207 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 SLC40A1Q9NP59 571 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 CLIC4Q9Y696 253 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 CARMIL3Q8ND23 1372 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 SPATA31A5Q5VU36 1347 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 SPATA31A7Q8IWB4 1347 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 FAM237AA0A1B0GTK4 181 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 GOLGA6L7A0A1B0GV03 622 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 ZFYP08048 801 aaPredicted RBP13.6□□□□□ -0.23
GFAP-228ENST00000638488 NAP1L1P55209 391 aaKnown RBP13.6□□□□□ -0.23
GFAP-228ENST00000638488 PTPN21Q16825 1174 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 BICDL1Q6ZP65 573 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.6□□□□□ -0.23
GFAP-228ENST00000638488 PIH1D3Q9NQM4 214 aaKnown RBP13.6□□□□□ -0.23
GFAP-228ENST00000638488 HOOK1Q9UJC3 728 aaKnown RBP13.6□□□□□ -0.23
GFAP-228ENST00000638488 HPSEQ9Y251 543 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 LAMA4Q16363 1823 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 SLIT2O94813 1529 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 SRRM3A6NNA2 597 aaPredicted RBP13.6□□□□□ -0.23
GFAP-228ENST00000638488 FOXP2O15409 715 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 SYKP43405 635 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 TRAPPC11Q7Z392 1133 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 PARP9Q8IXQ6 854 aa13.6□□□□□ -0.23
GFAP-228ENST00000638488 GUCY1B3Q02153 619 aa13.59□□□□□ -0.23
GFAP-228ENST00000638488 CKAP4Q07065 602 aaKnown RBP13.59□□□□□ -0.23
GFAP-228ENST00000638488 NR1I3Q14994 352 aa13.59□□□□□ -0.23
GFAP-228ENST00000638488 CCNI2Q6ZMN8 369 aaPredicted RBP13.59□□□□□ -0.23
GFAP-228ENST00000638488 ELOA2Q8IYF1 753 aaPredicted RBP13.59□□□□□ -0.23
GFAP-228ENST00000638488 CCDC26Q8TAB7 109 aa13.59□□□□□ -0.23
GFAP-228ENST00000638488 FAM184BQ9ULE4 1060 aa13.59□□□□□ -0.23
GFAP-228ENST00000638488 ANKRD36CQ5JPF3 1778 aa13.59□□□□□ -0.23
GFAP-228ENST00000638488 CAMTA2O94983 1202 aa13.59□□□□□ -0.23
GFAP-228ENST00000638488 EXOSC10Q01780 885 aaKnown RBP13.59□□□□□ -0.23
GFAP-228ENST00000638488 IFFO1Q0D2I5 559 aa13.59□□□□□ -0.23
GFAP-228ENST00000638488 PUM3Q15397 648 aaKnown RBP13.59□□□□□ -0.23
GFAP-228ENST00000638488 KIAA1328Q86T90 577 aa13.59□□□□□ -0.23
GFAP-228ENST00000638488 ENOX1Q8TC92 643 aaKnown RBP13.59□□□□□ -0.23
GFAP-228ENST00000638488 CDC5LQ99459 802 aaKnown RBP13.59□□□□□ -0.23
GFAP-228ENST00000638488 AGXT2Q9BYV1 514 aa13.59□□□□□ -0.23
GFAP-228ENST00000638488 DACH1Q9UI36 760 aa13.59□□□□□ -0.23
GFAP-228ENST00000638488 MYH3P11055 1940 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 MROH7-TTC4A0A0A0MT08 1334 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 A0A1B0GTH6 734 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 ZNF213O14771 459 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 TFRCP02786 760 aaKnown RBP13.58□□□□□ -0.24
GFAP-228ENST00000638488 NCAPH2Q6IBW4 605 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 PPFIBP1Q86W92 1011 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 AENQ8WTP8 325 aaKnown RBP13.58□□□□□ -0.24
GFAP-228ENST00000638488 NGLY1Q96IV0 654 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 HOMER3Q9NSC5 361 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 WWC3Q9ULE0 1092 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 WNK3Q9BYP7 1800 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 ZNF532Q9HCE3 1301 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 MPHOSPH10O00566 681 aaKnown RBP13.58□□□□□ -0.24
GFAP-228ENST00000638488 GCKP35557 465 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 ADD2P35612 726 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 ATP2B2Q01814 1243 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 RBBP5Q15291 538 aaKnown RBP13.58□□□□□ -0.24
GFAP-228ENST00000638488 FAM182BQ5T319 152 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 MYSM1Q5VVJ2 828 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 LPIN2Q92539 896 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 HOOK2Q96ED9 719 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 EPN3Q9H201 632 aa13.58□□□□□ -0.24
GFAP-228ENST00000638488 IQSEC3Q9UPP2 1182 aaPredicted RBP13.58□□□□□ -0.24
GFAP-228ENST00000638488 A0A0U1RQJ8 604 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 TTC36A6NLP5 189 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 TRAF1Q13077 416 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 EMC10Q5UCC4 262 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 NAA35Q5VZE5 725 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 ANO1Q5XXA6 986 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 CYB5D1Q6P9G0 228 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 RALYLQ86SE5 291 aaKnown RBP13.57□□□□□ -0.24
GFAP-228ENST00000638488 TAX1BP1Q86VP1 789 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 CEP57Q86XR8 500 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 ATRIPQ8WXE1 791 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 DENND2AQ9ULE3 1009 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 NFE2L3Q9Y4A8 694 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 MROH5Q6ZUA9 1318 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 PRC1O43663 620 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 MFAP3LO75121 409 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 SLC5A1P13866 664 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 PDIA3P30101 505 aaKnown RBP13.57□□□□□ -0.24
GFAP-228ENST00000638488 ALS2CLQ60I27 953 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 CDCA2Q69YH5 1023 aaPredicted RBP13.57□□□□□ -0.24
GFAP-228ENST00000638488 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 TMTC1Q8IUR5 882 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 CNGA4Q8IV77 575 aa13.57□□□□□ -0.24
GFAP-228ENST00000638488 RSRC1Q96IZ7 334 aaKnown RBP13.57□□□□□ -0.24
GFAP-228ENST00000638488 PSMD14O00487 310 aa13.56□□□□□ -0.24
GFAP-228ENST00000638488 TOM1O60784 492 aa13.56□□□□□ -0.24
GFAP-228ENST00000638488 MYBL2P10244 700 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms