RNA–Protein interactions for RNA: ENST00000638049.1

LGI1-230, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 5

Gene LGI1, Length 2,072 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-230ENST00000638049 IGF2BP3O00425 579 aaKnown RBP eCLIP5.76□□□□□ -1.49
LGI1-230ENST00000638049 MEIS1O00470 390 aa5.76□□□□□ -1.49
LGI1-230ENST00000638049 DIAPH1O60610 1272 aaKnown RBP5.76□□□□□ -1.49
LGI1-230ENST00000638049 ZNF865P0CJ78 1059 aaPredicted RBP5.76□□□□□ -1.49
LGI1-230ENST00000638049 NKPD1Q17RQ9 610 aa5.76□□□□□ -1.49
LGI1-230ENST00000638049 SLC10A6Q3KNW5 377 aa5.76□□□□□ -1.49
LGI1-230ENST00000638049 MTERF2Q49AM1 385 aa5.76□□□□□ -1.49
LGI1-230ENST00000638049 EEPD1Q7L9B9 569 aa5.76□□□□□ -1.49
LGI1-230ENST00000638049 SMARCC1Q92922 1105 aaPredicted RBP5.76□□□□□ -1.49
LGI1-230ENST00000638049 PPP1R14AQ96A00 147 aa5.76□□□□□ -1.49
LGI1-230ENST00000638049 POLR3GLQ9BT43 218 aa5.76□□□□□ -1.49
LGI1-230ENST00000638049 GP6Q9HCN6 339 aa5.76□□□□□ -1.49
LGI1-230ENST00000638049 GFOD1Q9NXC2 390 aa5.76□□□□□ -1.49
LGI1-230ENST00000638049 PLAGL2Q9UPG8 496 aa5.76□□□□□ -1.49
LGI1-230ENST00000638049 PCDHB12Q9Y5F1 795 aa5.76□□□□□ -1.49
LGI1-230ENST00000638049 FAM155AB1AL88 458 aaPredicted RBP5.75□□□□□ -1.49
LGI1-230ENST00000638049 CYP26A1O43174 497 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 RASGRF1Q13972 1273 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 SV2CQ496J9 727 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 KANSL2Q9H9L4 492 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 LEMD3Q9Y2U8 911 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 ANKRD34BA5PLL1 514 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 SMARCA5O60264 1052 aaPredicted RBP5.75□□□□□ -1.49
LGI1-230ENST00000638049 KIR3DL1P43629 444 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 ZNF445P59923 1031 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 JAZF1Q86VZ6 243 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 SPACA3Q8IXA5 215 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 LILRB2Q8N423 598 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 ZNF513Q8N8E2 541 aaPredicted RBP5.75□□□□□ -1.49
LGI1-230ENST00000638049 PIM2Q9P1W9 311 aa5.75□□□□□ -1.49
LGI1-230ENST00000638049 ZC3H7BQ9UGR2 993 aaKnown RBP5.75□□□□□ -1.49
LGI1-230ENST00000638049 PRAMEF1O95521 474 aa5.74□□□□□ -1.49
LGI1-230ENST00000638049 IGHA1P01876 353 aa5.74□□□□□ -1.49
LGI1-230ENST00000638049 ITGB7P26010 798 aa5.74□□□□□ -1.49
LGI1-230ENST00000638049 ANKRD39Q53RE8 183 aa5.74□□□□□ -1.49
LGI1-230ENST00000638049 NOL9Q5SY16 702 aaKnown RBP5.74□□□□□ -1.49
LGI1-230ENST00000638049 NOL6Q9H6R4 1146 aaKnown RBP5.74□□□□□ -1.49
LGI1-230ENST00000638049 KCNH3Q9ULD8 1083 aa5.74□□□□□ -1.49
LGI1-230ENST00000638049 SUGT1Q9Y2Z0 365 aa5.74□□□□□ -1.49
LGI1-230ENST00000638049 ST14Q9Y5Y6 855 aa5.74□□□□□ -1.49
LGI1-230ENST00000638049 MRPL42Q9Y6G3 142 aaKnown RBP5.74□□□□□ -1.49
LGI1-230ENST00000638049 H3BS24 57 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 TBX1O43435 398 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 CEACAM5P06731 702 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 IFRD2Q12894 506 aaPredicted RBP5.73□□□□□ -1.49
LGI1-230ENST00000638049 NMIQ13287 307 aaPredicted RBP5.73□□□□□ -1.49
LGI1-230ENST00000638049 PPP2R5DQ14738 602 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 TCEAL1Q15170 157 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 C22orf34Q6ZV56 151 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 NOP9Q86U38 636 aaKnown RBP5.73□□□□□ -1.49
LGI1-230ENST00000638049 COX4I2Q96KJ9 171 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 HSPA12BQ96MM6 686 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 APBA2Q99767 749 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 DUSP15Q9H1R2 295 aaPredicted RBP5.73□□□□□ -1.49
LGI1-230ENST00000638049 ZMYM5Q9UJ78 669 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 FOSL1P15407 271 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 SSRP1Q08945 709 aaKnown RBP5.73□□□□□ -1.49
LGI1-230ENST00000638049 LRP10Q7Z4F1 713 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 LRRN4CLQ8ND94 238 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 ST13P5Q8NFI4 369 aaPredicted RBP5.73□□□□□ -1.49
LGI1-230ENST00000638049 GBP3Q9H0R5 595 aa5.73□□□□□ -1.49
LGI1-230ENST00000638049 KDM2BQ8NHM5 1336 aa5.72□□□□□ -1.49
LGI1-230ENST00000638049 ITGAVP06756 1048 aa5.72□□□□□ -1.49
LGI1-230ENST00000638049 ITGA4P13612 1032 aa5.72□□□□□ -1.49
LGI1-230ENST00000638049 FAM177A1Q8N128 213 aaPredicted RBP5.72□□□□□ -1.49
LGI1-230ENST00000638049 FIBCD1Q8N539 461 aa5.72□□□□□ -1.49
LGI1-230ENST00000638049 WHRNQ9P202 907 aa5.72□□□□□ -1.49
LGI1-230ENST00000638049 ZSWIM5Q9P217 1185 aa5.72□□□□□ -1.49
LGI1-230ENST00000638049 LRP2BPQ9P2M1 347 aa5.72□□□□□ -1.49
LGI1-230ENST00000638049 SIGLEC6O43699 453 aa5.71□□□□□ -1.49
LGI1-230ENST00000638049 PPM1BO75688 479 aa5.71□□□□□ -1.49
LGI1-230ENST00000638049 CTSKP43235 329 aa5.71□□□□□ -1.49
LGI1-230ENST00000638049 PIWIL2Q8TC59 973 aaKnown RBP5.71□□□□□ -1.49
LGI1-230ENST00000638049 NETO1Q8TDF5 533 aa5.71□□□□□ -1.49
LGI1-230ENST00000638049 UBE2FQ969M7 185 aa5.71□□□□□ -1.49
LGI1-230ENST00000638049 ZDHHC15Q96MV8 337 aa5.71□□□□□ -1.49
LGI1-230ENST00000638049 DSCC1Q9BVC3 393 aa5.71□□□□□ -1.49
LGI1-230ENST00000638049 ASCC2Q9H1I8 757 aaPredicted RBP5.71□□□□□ -1.49
LGI1-230ENST00000638049 CHST7Q9NS84 486 aa5.71□□□□□ -1.49
LGI1-230ENST00000638049 A0A1W2PQU0 124 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 H0Y8X5 98 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 PPM1GO15355 546 aaPredicted RBP5.71□□□□□ -1.5
LGI1-230ENST00000638049 SRFP11831 508 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 CD96P40200 585 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 GRIA2P42262 883 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 ZNF143P52747 638 aaPredicted RBP5.71□□□□□ -1.5
LGI1-230ENST00000638049 CPSF6Q16630 551 aaKnown RBP eCLIP5.71□□□□□ -1.5
LGI1-230ENST00000638049 CLEC16AQ2KHT3 1053 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 CRTC3Q6UUV7 619 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 ZNF227Q86WZ6 799 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 NLGN1Q8N2Q7 840 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 BVESQ8NE79 360 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 SH3TC2Q8TF17 1288 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 RNPC3Q96LT9 517 aaKnown RBP5.71□□□□□ -1.5
LGI1-230ENST00000638049 HDAC8Q9BY41 377 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 MKNK2Q9HBH9 465 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 CGGBP1Q9UFW8 167 aaPredicted RBP5.71□□□□□ -1.5
LGI1-230ENST00000638049 AKT3Q9Y243 479 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 TBX22Q9Y458 520 aa5.71□□□□□ -1.5
LGI1-230ENST00000638049 FHOD1Q9Y613 1164 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms