RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 CCDC122Q5T0U0 273 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 ZNF662Q6ZS27 426 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 EPSTI1Q96J88 318 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 CAPS2Q9BXY5 557 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 ZSWIM5Q9P217 1185 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 HDAC6Q9UBN7 1215 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 IQSEC3Q9UPP2 1182 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 A0A087X0B3 334 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 A6NNZ2 444 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 RNF225M0QZC1 329 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 AGPSO00116 658 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 ATP1A1P05023 1023 aaKnown RBP17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 LIG3P49916 1009 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 ALX1Q15699 326 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 TUBB8Q3ZCM7 444 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 CAGE1Q8TC20 777 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 CHP1Q99653 195 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 TRIM10Q9UDY6 481 aa17.49■□□□□ 0.39
CACNA1A-235ENST00000637004 KRT86O43790 486 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 E2F4Q16254 413 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 TCP11X2Q5H9J9 407 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 TTLL7Q6ZT98 887 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 SEPT12Q8IYM1 358 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 BCAS4Q8TDM0 211 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 JAKMIP2Q96AA8 810 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 CARD10Q9BWT7 1032 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 TAB2Q9NYJ8 693 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 FAM184BQ9ULE4 1060 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 ECM29Q5VYK3 1845 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 NBPF26B4DH59 902 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 KCNJ18B7U540 433 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 PAK1Q13153 545 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 KCNJ12Q14500 433 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 RRAGBQ5VZM2 374 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 NBPF10Q6P3W6 841 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 NBPF15Q8N660 670 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 KRT23Q9C075 422 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 COL18A1P39060 1754 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 GOLGA8KD6RF30 607 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 XBP1P17861 261 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 CASP1P29466 404 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 MCAMP43121 646 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 UBXN1Q04323 297 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 AMOTL1Q8IY63 956 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 CAPZA3Q96KX2 299 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 GDAP1L1Q96MZ0 367 aa17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 LUC7L2Q9Y383 392 aaKnown RBP17.48■□□□□ 0.39
CACNA1A-235ENST00000637004 ANO9A1A5B4 782 aa17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 EIF3HO15372 352 aaKnown RBP eCLIP17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 CABP4P57796 275 aa17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 RUBCNQ92622 972 aa17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 PLCH1Q4KWH8 1693 aa17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 KAT6BQ8WYB5 2073 aa17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 OPA1O60313 960 aa17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 SRGAP2O75044 1071 aa17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 IDH1O75874 414 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 INPP5BP32019 993 aa17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 KIAA1328Q86T90 577 aa17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 OXER1Q8TDS5 423 aa17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 AIDAQ96BJ3 306 aa17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 ZNF512BQ96KM6 892 aaPredicted RBP17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 PYM1Q9BRP8 204 aaKnown RBP17.47■□□□□ 0.39
CACNA1A-235ENST00000637004 ZMYND10O75800 440 aa17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 MNAT1P51948 309 aa17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 RCAN1P53805 252 aa17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 TMTC2Q8N394 836 aa17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 GPATCH11Q8N954 259 aa17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 DNAJC7Q99615 494 aa17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 ZNF532Q9HCE3 1301 aa17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 COL14A1Q05707 1796 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 ERICH2A1L162 156 aa17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 IPO7O95373 1038 aaKnown RBP17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 GSCP56915 257 aaPredicted RBP17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 KAT2BQ92831 832 aa17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 NAPBQ9H115 298 aa17.46■□□□□ 0.39
CACNA1A-235ENST00000637004 IL2RBP14784 551 aa17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 HNRNPH1P31943 449 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 WTAPQ15007 396 aa17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 CCDC82Q8N4S0 544 aa17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 AENQ8WTP8 325 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 STRBPQ96SI9 672 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 ZBTB3Q9H5J0 574 aa17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 TTC26A0AVF1 554 aa17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 HERVK_113P62684 666 aa17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 GNGT1P63211 74 aa17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 IFIT5Q13325 482 aaKnown RBP17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 AKNAD1Q5T1N1 836 aa17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 B4GALNT4Q76KP1 1039 aa17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 NELFBQ8WX92 580 aa17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 RMND1Q9NWS8 449 aa17.45■□□□□ 0.38
CACNA1A-235ENST00000637004 A0A1W2PQC6 194 aa17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 PATL2C9JE40 543 aaKnown RBP17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 MYBL2P10244 700 aa17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 PDE6AP16499 860 aa17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 CYLC1P35663 651 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 SETQ01105 290 aaPredicted RBP17.44■□□□□ 0.38
CACNA1A-235ENST00000637004 MFSD6Q6ZSS7 791 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms