RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 USP17L24Q0WX57 530 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 MAP2K5Q13163 448 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 COL9A3Q14050 684 aaPredicted RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 GRB14Q14449 540 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 SHHQ15465 462 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 TRIM60Q495X7 471 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 CERKLQ49MI3 558 aaPredicted RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 FAM47AQ5JRC9 791 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 FAM83BQ5T0W9 1011 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 C12orf60Q5U649 245 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 VPS53Q5VIR6 699 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 WDR78Q5VTH9 848 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 FAM109BQ6ICB4 259 aaPredicted RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 TTBK2Q6IQ55 1244 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP17L2Q6R6M4 530 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 LBX2Q6XYB7 198 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 SPRED2Q7Z698 418 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 NECAB2Q7Z6G3 386 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 PLEKHH3Q7Z736 793 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 SKAP1Q86WV1 359 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLF2Q8IX21 1173 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 FTSJ3Q8IY81 847 aaKnown RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 GPRC5AQ8NFJ5 357 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 PI4K2BQ8TCG2 481 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 TRIM43Q96BQ3 446 aaPredicted RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 COA7Q96BR5 231 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 VWCEQ96DN2 955 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 C12orf42Q96LP6 360 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 GUCD1Q96NT3 240 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 STRBPQ96SI9 672 aaKnown RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 CRBNQ96SW2 442 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 FEZ1Q99689 392 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 HAUS7Q99871 368 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 NUDT12Q9BQG2 462 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 NOL10Q9BSC4 688 aaKnown RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 TANGO6Q9C0B7 1094 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 SENP6Q9GZR1 1112 aaPredicted RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 NBPF3Q9H094 633 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 KIAA1683Q9H0B3 1180 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 EHD4Q9H223 541 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 IL25Q9H293 177 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 DHX36Q9H2U1 1008 aaKnown RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 TTYH1Q9H313 450 aaPredicted RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 CPVLQ9H3G5 476 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 C11orf49Q9H6J7 331 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 AS3MTQ9HBK9 375 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 HMX1Q9NP08 348 aaPredicted RBP1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 PRDM6Q9NQX0 595 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 PAG1Q9NWQ8 432 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 MTMR10Q9NXD2 777 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 MCM9Q9NXL9 1143 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 TMOD4Q9NZQ9 345 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 SERPINB13Q9UIV8 391 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 RCAN3Q9UKA8 241 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 ADAMTS5Q9UNA0 930 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 RABGAP1Q9Y3P9 1069 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC4A4Q9Y6R1 1079 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 COL4A6Q14031 1691 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 TCHHQ07283 1943 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 MIA3Q5JRA6 1907 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 MYH15Q9Y2K3 1946 aa1.95□□□□□ -2.1
SYNGAP1-216ENST00000636640 DENND4AQ7Z401 1863 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZNF536O15090 1300 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 GRIN2DO15399 1336 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 UMODL1Q5DID0 1318 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 DOCK8Q8NF50 2099 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ATG2BQ96BY7 2078 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 VWA8A3KMH1 1905 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 CEP192Q8TEP8 1941 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 DNAJC25-GNG10A0A024R161 153 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 A0A0D9SFI3 127 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 SOWAHBA6NEL2 793 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC15A5A6NIM6 579 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 MINDY4BA8MYZ0 360 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 VWA5AO00534 786 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 RAD21O60216 631 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ADAMTS4O75173 837 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ARHGEF15O94989 841 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 BAG3O95817 575 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 NDUFB10O96000 172 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 IGHDP01880 384 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 MYCNP04198 464 aaPredicted RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 HLA-DOAP06340 250 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 HOXC6P09630 235 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 IFIT2P09913 472 aaKnown RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZNF865P0CJ78 1059 aaPredicted RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 XRCC5P13010 732 aaKnown RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 PLCG2P16885 1265 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZKSCAN1P17029 563 aaPredicted RBP1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 MAPK4P31152 587 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 BMP8BP34820 402 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 PBX2P40425 430 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 RGS2P41220 211 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 BEX3Q00994 111 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ATP2B2Q01814 1243 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 CNTN2Q02246 1040 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 TLE2Q04725 743 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 ICA1Q05084 483 aa1.94□□□□□ -2.1
SYNGAP1-216ENST00000636640 MAP3K12Q12852 859 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms