RNA–Protein interactions for RNA: ENST00000635841.1

XIST-211, X inactive specific transcript, humanhuman

TSL 5 BASIC

Gene XIST, Length 1,734 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-211ENST00000635841 SCYL3Q8IZE3 742 aa10.25□□□□□ -0.77
XIST-211ENST00000635841 ZNF526Q8TF50 670 aaPredicted RBP10.25□□□□□ -0.77
XIST-211ENST00000635841 DCAF4Q8WV16 495 aa10.25□□□□□ -0.77
XIST-211ENST00000635841 C8orf76Q96K31 380 aa10.25□□□□□ -0.77
XIST-211ENST00000635841 ALG1Q9BT22 464 aa10.25□□□□□ -0.77
XIST-211ENST00000635841 GOPCQ9HD26 462 aa10.25□□□□□ -0.77
XIST-211ENST00000635841 GPCPD1Q9NPB8 672 aa10.25□□□□□ -0.77
XIST-211ENST00000635841 ISY1Q9ULR0 285 aaKnown RBP10.25□□□□□ -0.77
XIST-211ENST00000635841 MTMR6Q9Y217 621 aa10.25□□□□□ -0.77
XIST-211ENST00000635841 TMX2Q9Y320 296 aa10.25□□□□□ -0.77
XIST-211ENST00000635841 CNTNAP5Q8WYK1 1306 aa10.25□□□□□ -0.77
XIST-211ENST00000635841 NDUFB10O96000 172 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 ZSCAN22P10073 491 aaPredicted RBP10.24□□□□□ -0.77
XIST-211ENST00000635841 IREB2P48200 963 aaKnown RBP10.24□□□□□ -0.77
XIST-211ENST00000635841 ZNF543Q08ER8 600 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 TTLL12Q14166 644 aaPredicted RBP10.24□□□□□ -0.77
XIST-211ENST00000635841 GPATCH4Q5T3I0 446 aaKnown RBP10.24□□□□□ -0.77
XIST-211ENST00000635841 MAP1SQ66K74 1059 aaPredicted RBP10.24□□□□□ -0.77
XIST-211ENST00000635841 CCDC84Q86UT8 332 aaPredicted RBP10.24□□□□□ -0.77
XIST-211ENST00000635841 TNPO1Q92973 898 aaKnown RBP10.24□□□□□ -0.77
XIST-211ENST00000635841 GMCL1Q96IK5 515 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 AIFM3Q96NN9 605 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 FEZ1Q99689 392 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 SPZ1Q9BXG8 430 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 NMRK2Q9NPI5 230 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 RBM27Q9P2N5 1060 aaKnown RBP10.24□□□□□ -0.77
XIST-211ENST00000635841 hCG_1642624A0A1W2PR95 340 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 UBE2Q2LH0YL09 131 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 SMARCA1P28370 1054 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 MAP3K9P80192 1104 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 TRIM29Q14134 588 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 NOL9Q5SY16 702 aaKnown RBP10.24□□□□□ -0.77
XIST-211ENST00000635841 KCTD1Q719H9 257 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 LDHDQ86WU2 507 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 SPICE1Q8N0Z3 855 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 FBXO18Q8NFZ0 1043 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.24□□□□□ -0.77
XIST-211ENST00000635841 PIBF1Q8WXW3 757 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 CPVLQ9H3G5 476 aa10.24□□□□□ -0.77
XIST-211ENST00000635841 F13A1P00488 732 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 BMP3P12645 472 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 PTPRAP18433 802 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 GUCY1B3Q02153 619 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 ZYXQ15942 572 aaKnown RBP10.23□□□□□ -0.77
XIST-211ENST00000635841 PKN1Q16512 942 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 SLC35G1Q2M3R5 365 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 MCTP1Q6DN14 999 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 OTUD7BQ6GQQ9 843 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 RGS22Q8NE09 1264 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 RRP36Q96EU6 259 aaKnown RBP10.23□□□□□ -0.77
XIST-211ENST00000635841 NUP88Q99567 741 aaPredicted RBP10.23□□□□□ -0.77
XIST-211ENST00000635841 UBA5Q9GZZ9 404 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 VCPKMTQ9H867 229 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 AS3MTQ9HBK9 375 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 VAT1LQ9HCJ6 419 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 CSADQ9Y600 493 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 ZHX2Q9Y6X8 837 aa10.23□□□□□ -0.77
XIST-211ENST00000635841 USP17L10C9JJH3 530 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 CYTH3O43739 400 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 SCG2P13521 617 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 XBP1P17861 261 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 IKQ13123 557 aaPredicted RBP10.22□□□□□ -0.77
XIST-211ENST00000635841 VGLL4Q14135 290 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 PFKFB3Q16875 520 aaPredicted RBP10.22□□□□□ -0.77
XIST-211ENST00000635841 KRT40Q6A162 431 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 TTBK2Q6IQ55 1244 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.22□□□□□ -0.77
XIST-211ENST00000635841 FERMT3Q86UX7 667 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 WDR18Q9BV38 432 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 RIOX1Q9H6W3 641 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 GJB4Q9NTQ9 266 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.22□□□□□ -0.77
XIST-211ENST00000635841 SEC63Q9UGP8 760 aaKnown RBP10.22□□□□□ -0.77
XIST-211ENST00000635841 ATP6V1DQ9Y5K8 247 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 OTOFQ9HC10 1997 aa10.22□□□□□ -0.77
XIST-211ENST00000635841 TMEM232C9JQI7 657 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 TRAF5O00463 557 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 SLC16A2P36021 539 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 USP14P54578 494 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 SPP2Q13103 211 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 KIAA1755Q5JYT7 1200 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 ARMC9Q7Z3E5 817 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 ADGRF4Q8IZF3 695 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 ZNF280CQ8ND82 737 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 PIGSQ96S52 555 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 KIAA1683Q9H0B3 1180 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 ZNF408Q9H9D4 720 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 SNCAIPQ9Y6H5 919 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 PHIPQ8WWQ0 1821 aa10.21□□□□□ -0.77
XIST-211ENST00000635841 TRIM75PA6NK02 468 aa10.21□□□□□ -0.78
XIST-211ENST00000635841 BACE1P56817 501 aa10.21□□□□□ -0.78
XIST-211ENST00000635841 MTMR2Q13614 643 aa10.21□□□□□ -0.78
XIST-211ENST00000635841 SAFBQ15424 915 aaKnown RBP eCLIP10.21□□□□□ -0.78
XIST-211ENST00000635841 MAP3K11Q16584 847 aa10.21□□□□□ -0.78
XIST-211ENST00000635841 FOXD4L6Q3SYB3 417 aaPredicted RBP10.21□□□□□ -0.78
XIST-211ENST00000635841 FAM83BQ5T0W9 1011 aa10.21□□□□□ -0.78
XIST-211ENST00000635841 FOXD4L3Q6VB84 417 aaPredicted RBP10.21□□□□□ -0.78
XIST-211ENST00000635841 MOB2Q70IA6 237 aa10.21□□□□□ -0.78
XIST-211ENST00000635841 HOMER1Q86YM7 354 aa10.21□□□□□ -0.78
XIST-211ENST00000635841 ANKRD13AQ8IZ07 590 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms