RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 TBX1O43435 398 aa8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 BMP3P12645 472 aa8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 MAP4P27816 1152 aaKnown RBP8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 L1CAMP32004 1257 aa8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 PPP2R2AP63151 447 aa8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 RNF4P78317 190 aa8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 CDK5R2Q13319 367 aa8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 MAP7Q14244 749 aa8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 CBX2Q14781 532 aaPredicted RBP8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 ARHGEF39Q8N4T4 335 aa8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 SSBP4Q9BWG4 385 aaPredicted RBP8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 ASPNQ9BXN1 380 aa8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 MKRN2Q9H000 416 aaKnown RBP8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 TMX1Q9H3N1 280 aa8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 WHRNQ9P202 907 aa8.71□□□□□ -1.02
SMARCA2-240ENST00000635392 A0A087WZG4 1122 aa8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 LRRN2O75325 713 aa8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 APBA3O96018 575 aa8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 VIL1P09327 827 aaKnown RBP8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 GRIA2P42262 883 aa8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 ZNF445P59923 1031 aa8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 LRRN4CLQ8ND94 238 aa8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 OSBP2Q969R2 916 aa8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 DHRS4Q9BTZ2 278 aa8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 SLKQ9H2G2 1235 aaPredicted RBP8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 PCDH12Q9NPG4 1184 aa8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 EMC9Q9Y3B6 208 aa8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 COL4A3BPQ9Y5P4 624 aa8.7□□□□□ -1.02
SMARCA2-240ENST00000635392 AGRPO00253 132 aa8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 LEFTY1O75610 366 aa8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 RFPL3O75679 317 aa8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 FGFR1P11362 822 aa8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 ETV3P41162 512 aa8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 AMPD3Q01432 767 aa8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 HSP90AA2PQ14568 343 aaPredicted RBP8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 C21orf62-AS1Q17RA5 79 aa8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 BVESQ8NE79 360 aa8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 GATA6Q92908 595 aa8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 AARSD1Q9BTE6 412 aaKnown RBP8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 DUSP23Q9BVJ7 150 aa8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 YIPF2Q9BWQ6 316 aa8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 NOP58Q9Y2X3 529 aaKnown RBP8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 MRPS23Q9Y3D9 190 aaKnown RBP8.69□□□□□ -1.02
SMARCA2-240ENST00000635392 TRAV20A0A0B4J274 112 aa8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 FAM95CA0A1B0GW59 222 aa8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 PPM1BO75688 479 aa8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 SNW1Q13573 536 aaKnown RBP8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 TM4SF20Q53R12 229 aa8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 TXNRD3Q86VQ6 643 aa8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 SCUBE1Q8IWY4 988 aa8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 TOP6BLQ8N6T0 577 aa8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 UTP4Q969X6 686 aaKnown RBP8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 PRDM14Q9GZV8 571 aa8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 GBP3Q9H0R5 595 aa8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 ABCC9O60706 1549 aa8.68□□□□□ -1.02
SMARCA2-240ENST00000635392 TRBV23-1A0A0A0MS06 115 aa8.67□□□□□ -1.02
SMARCA2-240ENST00000635392 ADAT2Q7Z6V5 191 aaKnown RBP8.67□□□□□ -1.02
SMARCA2-240ENST00000635392 TRIM59Q8IWR1 403 aa8.67□□□□□ -1.02
SMARCA2-240ENST00000635392 SYTL5Q8TDW5 730 aaPredicted RBP8.67□□□□□ -1.02
SMARCA2-240ENST00000635392 NINJ1Q92982 152 aa8.67□□□□□ -1.02
SMARCA2-240ENST00000635392 CLUHP3Q96NS8 147 aa8.67□□□□□ -1.02
SMARCA2-240ENST00000635392 NCOA5Q9HCD5 579 aaKnown RBP8.67□□□□□ -1.02
SMARCA2-240ENST00000635392 PLAAQ9Y263 795 aa8.67□□□□□ -1.02
SMARCA2-240ENST00000635392 FHOD1Q9Y613 1164 aa8.67□□□□□ -1.02
SMARCA2-240ENST00000635392 PLD2O14939 933 aa8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 PABPC1P11940 636 aaKnown RBP8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 PABPC4Q13310 644 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 ALYREFQ86V81 257 aaKnown RBP8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 RPUSD2Q8IZ73 545 aaKnown RBP8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 ADCY4Q8NFM4 1077 aa8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 ZCRB1Q8TBF4 217 aaKnown RBP8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 Q96M66 194 aa8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 CWC22Q9HCG8 908 aaKnown RBP8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 PRR13Q9NZ81 148 aa8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 LRP2BPQ9P2M1 347 aa8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 CGGBP1Q9UFW8 167 aaPredicted RBP8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 AKT3Q9Y243 479 aa8.66□□□□□ -1.02
SMARCA2-240ENST00000635392 RAPGEF3O95398 923 aa8.65□□□□□ -1.02
SMARCA2-240ENST00000635392 ITGA4P13612 1032 aa8.65□□□□□ -1.02
SMARCA2-240ENST00000635392 IGBP1P78318 339 aa8.65□□□□□ -1.02
SMARCA2-240ENST00000635392 CYP4F3Q08477 520 aa8.65□□□□□ -1.02
SMARCA2-240ENST00000635392 BEND4Q6ZU67 534 aa8.65□□□□□ -1.02
SMARCA2-240ENST00000635392 KRT26Q7Z3Y9 468 aa8.65□□□□□ -1.02
SMARCA2-240ENST00000635392 BRF1Q92994 677 aa8.65□□□□□ -1.02
SMARCA2-240ENST00000635392 HEXIM2Q96MH2 286 aaKnown RBP8.65□□□□□ -1.02
SMARCA2-240ENST00000635392 DIS3Q9Y2L1 958 aaKnown RBP8.65□□□□□ -1.02
SMARCA2-240ENST00000635392 PCDHB12Q9Y5F1 795 aa8.65□□□□□ -1.02
SMARCA2-240ENST00000635392 hCG_2014768A0A024R1R8 64 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 A0A087X0B3 334 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 PRODHO43272 600 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 KCNQ2O43526 872 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 DLX3O60479 287 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 C6orf222P0C671 652 aaPredicted RBP8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 POU3F3P20264 500 aaPredicted RBP8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 RXRBP28702 533 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 ADMP35318 185 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 SF1Q15637 639 aaKnown RBP8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 NFKBIBQ15653 356 aa8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 FNDC3BQ53EP0 1204 aaKnown RBP8.64□□□□□ -1.03
SMARCA2-240ENST00000635392 PAOXQ6QHF9 649 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms