RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 RWDD2AQ9UIY3 292 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 LAMB2P55268 1798 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 BAZ2AQ9UIF9 1905 aaKnown RBP12.1□□□□□ -0.47
PSPC1-207ENST00000635251 ITIH6Q6UXX5 1313 aa12.1□□□□□ -0.47
PSPC1-207ENST00000635251 STRCQ7RTU9 1775 aa12.1□□□□□ -0.47
PSPC1-207ENST00000635251 A0A0U1RQJ8 604 aa12.1□□□□□ -0.47
PSPC1-207ENST00000635251 CYP2D6P10635 497 aa12.1□□□□□ -0.47
PSPC1-207ENST00000635251 CHMP4BP1P59074 171 aa12.1□□□□□ -0.47
PSPC1-207ENST00000635251 KIF4BQ2VIQ3 1234 aa12.1□□□□□ -0.47
PSPC1-207ENST00000635251 PDXDC2PQ6P474 469 aa12.1□□□□□ -0.47
PSPC1-207ENST00000635251 CLEC4GQ6UXB4 293 aa12.1□□□□□ -0.47
PSPC1-207ENST00000635251 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
PSPC1-207ENST00000635251 KAT14Q9H8E8 782 aa12.1□□□□□ -0.47
PSPC1-207ENST00000635251 TFCP2L1Q9NZI6 479 aa12.1□□□□□ -0.47
PSPC1-207ENST00000635251 ARPP21Q9UBL0 812 aaPredicted RBP12.1□□□□□ -0.47
PSPC1-207ENST00000635251 LIMA1Q9UHB6 759 aaKnown RBP12.1□□□□□ -0.47
PSPC1-207ENST00000635251 PUF60Q9UHX1 559 aaKnown RBP12.1□□□□□ -0.47
PSPC1-207ENST00000635251 CCDC66A2RUB6 948 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 KCNJ18B7U540 433 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 RPN1P04843 607 aaKnown RBP12.09□□□□□ -0.47
PSPC1-207ENST00000635251 KLRK1P26718 216 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 CALML3P27482 149 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 STAT6P42226 847 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 COPB1P53618 953 aaKnown RBP12.09□□□□□ -0.47
PSPC1-207ENST00000635251 KCNJ12Q14500 433 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 ZNF658Q5TYW1 1059 aaPredicted RBP12.09□□□□□ -0.47
PSPC1-207ENST00000635251 RASGRP2Q7LDG7 609 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 TMTC1Q8IUR5 882 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 MARCH10Q8NA82 808 aaPredicted RBP12.09□□□□□ -0.47
PSPC1-207ENST00000635251 ACRBPQ8NEB7 543 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 ATP8A2Q9NTI2 1148 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 TTF2Q9UNY4 1162 aaKnown RBP12.09□□□□□ -0.47
PSPC1-207ENST00000635251 MAPK8IP1Q9UQF2 711 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 ADAMTS2O95450 1211 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 TBC1D8O95759 1140 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 HIBADHP31937 336 aaKnown RBP12.09□□□□□ -0.47
PSPC1-207ENST00000635251 IL17AQ16552 155 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 TAF3Q5VWG9 929 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 JAKMIP3Q5VZ66 844 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 SRGAP1Q7Z6B7 1085 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 FBXO33Q7Z6M2 555 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 BLIDQ8IZY5 108 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 CEP112Q8N8E3 955 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 ABHD10Q9NUJ1 306 aa12.09□□□□□ -0.47
PSPC1-207ENST00000635251 CTAGE9A4FU28 777 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 VEGFAP15692 232 aaPredicted RBP12.08□□□□□ -0.48
PSPC1-207ENST00000635251 PRDX5P30044 214 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 CDC25AP30304 524 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 LONP1P36776 959 aaKnown RBP12.08□□□□□ -0.48
PSPC1-207ENST00000635251 TRIM14Q14142 442 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 TCP11X2Q5H9J9 407 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 CYP26C1Q6V0L0 522 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 SLC35F6Q8N357 371 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 GPKOWQ92917 476 aaPredicted RBP eCLIP12.08□□□□□ -0.48
PSPC1-207ENST00000635251 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.48
PSPC1-207ENST00000635251 MTRQ99707 1265 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 MCM9Q9NXL9 1143 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 CDC23Q9UJX2 597 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 JAG2Q9Y219 1238 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 SPATA31A1Q5TZJ5 1347 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 WNK3Q9BYP7 1800 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 CCDC194A0A1B0GVG4 234 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 PES1O00541 588 aaKnown RBP12.08□□□□□ -0.48
PSPC1-207ENST00000635251 ADAMTS3O15072 1205 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 SASH3O75995 380 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 UBXN1Q04323 297 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 ARL6IP4Q66PJ3 421 aaKnown RBP12.08□□□□□ -0.48
PSPC1-207ENST00000635251 WWC2Q6AWC2 1192 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 GDAQ9Y2T3 454 aa12.08□□□□□ -0.48
PSPC1-207ENST00000635251 THRAP3Q9Y2W1 955 aaKnown RBP12.08□□□□□ -0.48
PSPC1-207ENST00000635251 DLEC1Q9Y238 1755 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 OAS2P29728 719 aaKnown RBP12.07□□□□□ -0.48
PSPC1-207ENST00000635251 PRCPP42785 496 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 RPS8P62241 208 aaKnown RBP12.07□□□□□ -0.48
PSPC1-207ENST00000635251 ERVK-24P63145 666 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 TFAP4Q01664 338 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 DZIP1Q86YF9 867 aaKnown RBP12.07□□□□□ -0.48
PSPC1-207ENST00000635251 RASGRP4Q8TDF6 673 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 PCDHA4Q9UN74 947 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 MTMR7Q9Y216 660 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 COL16A1Q07092 1604 aaPredicted RBP12.07□□□□□ -0.48
PSPC1-207ENST00000635251 SCN7AQ01118 1682 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 LRRC10BA6NIK2 292 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 USP17L8P0C7I0 530 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 KRT9P35527 623 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 USP5P45974 858 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 TUBB2AQ13885 445 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 SMC1AQ14683 1233 aaKnown RBP12.07□□□□□ -0.48
PSPC1-207ENST00000635251 SBK1Q52WX2 424 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 DTHD1Q6ZMT9 781 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 NLRP3Q96P20 1036 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 NAPGQ99747 312 aaPredicted RBP12.07□□□□□ -0.48
PSPC1-207ENST00000635251 TUBB2BQ9BVA1 445 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 A0A1B0GUL6 1792 aa12.07□□□□□ -0.48
PSPC1-207ENST00000635251 RREB1Q92766 1687 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 FAM205AQ6ZU69 1335 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 MYH14Q7Z406 1995 aaKnown RBP12.06□□□□□ -0.48
PSPC1-207ENST00000635251 TAF1P21675 1872 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
PSPC1-207ENST00000635251 KCNQ2O43526 872 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms