RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 CCDC14Q49A88 953 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 TBC1D7Q9P0N9 293 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 PARP2Q9UGN5 583 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 SAP30BPQ9UHR5 308 aaKnown RBP12.89□□□□□ -0.35
COL11A1-211ENST00000635193 ADCY9O60503 1353 aa12.89□□□□□ -0.35
COL11A1-211ENST00000635193 TRPC3Q13507 836 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 LRRC23Q53EV4 343 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-211ENST00000635193 NELFCDQ8IXH7 590 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 ZBTB17Q13105 803 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 CLIC6Q96NY7 704 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 RTEL1Q9NZ71 1219 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 ZMYM6O95789 1325 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 ZKSCAN8Q15776 578 aaPredicted RBP12.88□□□□□ -0.35
COL11A1-211ENST00000635193 MAP3K21Q5TCX8 1036 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 FBXO38Q6PIJ6 1188 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 EPSTI1Q96J88 318 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 CCDC151A5D8V7 595 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 BIRC3Q13489 604 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 LIN9Q5TKA1 542 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 KCTD16Q68DU8 428 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 CCDC197Q8NCU1 140 aa12.88□□□□□ -0.35
COL11A1-211ENST00000635193 MPHOSPH6Q99547 160 aaKnown RBP12.88□□□□□ -0.35
COL11A1-211ENST00000635193 AMFRQ9UKV5 643 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 EPN1Q9Y6I3 576 aaPredicted RBP12.87□□□□□ -0.35
COL11A1-211ENST00000635193 PLXNC1O60486 1568 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 KCNK3O14649 394 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 HSPD1P10809 573 aaKnown RBP12.87□□□□□ -0.35
COL11A1-211ENST00000635193 CALCRLQ16602 461 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 TCP11Q8WWU5 503 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 MAP4K1Q92918 833 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 BCAP29Q9UHQ4 241 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 PPP1R9AQ9ULJ8 1098 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 MAGI2Q86UL8 1455 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 H7C1D1 291 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 BAG2O95816 211 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 ADD1P35611 737 aaKnown RBP12.87□□□□□ -0.35
COL11A1-211ENST00000635193 SLC35F6Q8N357 371 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 LPIN2Q92539 896 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 FNBP1Q96RU3 617 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 LSM14BQ9BX40 385 aaKnown RBP12.87□□□□□ -0.35
COL11A1-211ENST00000635193 Q9H521 79 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 ARHGEF10O15013 1369 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 PCDH11XQ9BZA7 1347 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 PCDH11YQ9BZA8 1340 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 PNMA6AP0CW24 399 aaPredicted RBP12.87□□□□□ -0.35
COL11A1-211ENST00000635193 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
COL11A1-211ENST00000635193 UNC5CLQ8IV45 518 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 SPATA5Q8NB90 893 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 FBXO18Q8NFZ0 1043 aa12.87□□□□□ -0.35
COL11A1-211ENST00000635193 CHMP2AO43633 222 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 BUB1O43683 1085 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 PDIA3P30101 505 aaKnown RBP12.86□□□□□ -0.35
COL11A1-211ENST00000635193 DPCR1Q3MIW9 517 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 TPTE2Q6XPS3 522 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 TEX11Q8IYF3 940 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 ZNF654Q8IZM8 581 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 TTC16Q8NEE8 873 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 NEURL1BA8MQ27 555 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 KRIT1O00522 736 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 IKBKBO14920 756 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 PDE8AO60658 829 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 ADCY7P51828 1080 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 HSP90AA5PQ58FG0 334 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
COL11A1-211ENST00000635193 CASP14P31944 242 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 GOLGA8FQ08AF8 430 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 GOLGA8DPQ0D2H9 430 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 NCAPH2Q6IBW4 605 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 SPTLC3Q9NUV7 552 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 GCC2Q8IWJ2 1684 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 GNA14O95837 355 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 PPP1R21Q6ZMI0 780 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 TADA2BQ86TJ2 420 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 ZNF354CQ86Y25 554 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 CABLES1Q8TDN4 633 aa12.86□□□□□ -0.35
COL11A1-211ENST00000635193 ACTR5Q9H9F9 607 aaPredicted RBP12.86□□□□□ -0.35
COL11A1-211ENST00000635193 GAS8O95995 478 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 PCDHA5Q9Y5H7 936 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 ERBB4Q15303 1308 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 ARHGAP42A6NI28 874 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 SUN1O94901 812 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 RILPQ96NA2 401 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 HAUS7Q99871 368 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 SLC52A2Q9HAB3 445 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 KDRP35968 1356 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 BCRP11274 1271 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 NCBP1Q09161 790 aaKnown RBP12.85□□□□□ -0.35
COL11A1-211ENST00000635193 RAD51AP2Q09MP3 1159 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 TMCO4Q5TGY1 634 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 CFAP61Q8NHU2 1237 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 NGLY1Q96IV0 654 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 GLT8D2Q9H1C3 349 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 MYO1AQ9UBC5 1043 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 DNM3Q9UQ16 869 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
COL11A1-211ENST00000635193 GTPBP6O43824 516 aaPredicted RBP12.85□□□□□ -0.35
COL11A1-211ENST00000635193 CMTR1Q8N1G2 835 aaKnown RBP12.85□□□□□ -0.35
COL11A1-211ENST00000635193 LZTS2Q9BRK4 669 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms