RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ZKSCAN3Q9BRR0 538 aa17.35■□□□□ 0.37
CDC42BPB-209ENST00000634889 ARHGAP39Q9C0H5 1083 aa17.35■□□□□ 0.37
CDC42BPB-209ENST00000634889 TXNRD2Q9NNW7 524 aa17.35■□□□□ 0.37
CDC42BPB-209ENST00000634889 ADAMTS5Q9UNA0 930 aa17.35■□□□□ 0.37
CDC42BPB-209ENST00000634889 TRIM17Q9Y577 477 aa17.35■□□□□ 0.37
CDC42BPB-209ENST00000634889 TAF6LQ9Y6J9 622 aa17.35■□□□□ 0.37
CDC42BPB-209ENST00000634889 TNKSO95271 1327 aa17.35■□□□□ 0.37
CDC42BPB-209ENST00000634889 BMP3P12645 472 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 SLC1A4P43007 532 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 PRMT2P55345 433 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 CAP1Q01518 475 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 POTEEQ6S8J3 1075 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 STOX1Q6ZVD7 989 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 TNS4Q8IZW8 715 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 ENAHQ8N8S7 591 aaPredicted RBP17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 DCAF4Q8WV16 495 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 TRIM47Q96LD4 638 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 NUP88Q99567 741 aaPredicted RBP17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 PAGR1Q9BTK6 254 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 FEM1BQ9UK73 627 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 PPP1R9AQ9ULJ8 1098 aa17.34■□□□□ 0.37
CDC42BPB-209ENST00000634889 CNMDO75829 334 aa17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 FMNL1O95466 1100 aaPredicted RBP17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 HOXD10P28358 340 aa17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 CTGFP29279 349 aa17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 CCNA1P78396 465 aa17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 SART3Q15020 963 aaKnown RBP17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 TSGA10IPQ3SY00 556 aa17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 FBXO46Q6PJ61 603 aaPredicted RBP17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 CYB5R4Q7L1T6 521 aa17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 PRPF38AQ8NAV1 312 aaKnown RBP17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 SLF1Q9BQI6 1058 aa17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 MCOLN1Q9GZU1 580 aa17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 FBXO28Q9NVF7 368 aa17.33■□□□□ 0.36
CDC42BPB-209ENST00000634889 HTTP42858 3142 aa17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 TNPO2O14787 897 aaKnown RBP17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 PLA2G6O60733 806 aa17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 MCCP23508 829 aa17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 MAPK4P31152 587 aa17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 STAT2P52630 851 aa17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 FAM160B2Q86V87 743 aa17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 MB21D2Q8IYB1 491 aaPredicted RBP17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 ATG4CQ96DT6 458 aa17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 MTA3Q9BTC8 594 aa17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 KAT14Q9H8E8 782 aa17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 BTBD7Q9P203 1132 aa17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 PTPN22Q9Y2R2 807 aa17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 COL11A1P12107 1806 aaPredicted RBP17.32■□□□□ 0.36
CDC42BPB-209ENST00000634889 ERICH2A1L162 156 aa17.31■□□□□ 0.36
CDC42BPB-209ENST00000634889 VWA5AO00534 786 aa17.31■□□□□ 0.36
CDC42BPB-209ENST00000634889 SNHG28P0DPA3 235 aa17.31■□□□□ 0.36
CDC42BPB-209ENST00000634889 PDHBP11177 359 aa17.31■□□□□ 0.36
CDC42BPB-209ENST00000634889 HSPA4P34932 840 aa17.31■□□□□ 0.36
CDC42BPB-209ENST00000634889 KRT32Q14532 448 aa17.31■□□□□ 0.36
CDC42BPB-209ENST00000634889 SEC23AQ15436 765 aa17.31■□□□□ 0.36
CDC42BPB-209ENST00000634889 IFIT1BQ5T764 474 aaKnown RBP17.31■□□□□ 0.36
CDC42BPB-209ENST00000634889 PNMA1Q8ND90 353 aa17.31■□□□□ 0.36
CDC42BPB-209ENST00000634889 CHURC1Q8WUH1 139 aa17.31■□□□□ 0.36
CDC42BPB-209ENST00000634889 COA7Q96BR5 231 aa17.31■□□□□ 0.36
CDC42BPB-209ENST00000634889 TMEM232C9JQI7 657 aa17.3■□□□□ 0.36
CDC42BPB-209ENST00000634889 PEX10O60683 326 aa17.3■□□□□ 0.36
CDC42BPB-209ENST00000634889 EIF5BO60841 1220 aaKnown RBP17.3■□□□□ 0.36
CDC42BPB-209ENST00000634889 FDX1P10109 184 aa17.3■□□□□ 0.36
CDC42BPB-209ENST00000634889 MCM5P33992 734 aa17.3■□□□□ 0.36
CDC42BPB-209ENST00000634889 Q3C1V9 767 aa17.3■□□□□ 0.36
CDC42BPB-209ENST00000634889 CCAR1Q8IX12 1150 aaKnown RBP17.3■□□□□ 0.36
CDC42BPB-209ENST00000634889 KCNB2Q92953 911 aa17.3■□□□□ 0.36
CDC42BPB-209ENST00000634889 SPATC1LQ9H0A9 340 aa17.3■□□□□ 0.36
CDC42BPB-209ENST00000634889 SRRDQ9UH36 339 aa17.3■□□□□ 0.36
CDC42BPB-209ENST00000634889 IFIT3O14879 490 aaKnown RBP17.29■□□□□ 0.36
CDC42BPB-209ENST00000634889 ANTXR2P58335 489 aa17.29■□□□□ 0.36
CDC42BPB-209ENST00000634889 CCDC96Q2M329 555 aa17.29■□□□□ 0.36
CDC42BPB-209ENST00000634889 GPATCH4Q5T3I0 446 aaKnown RBP17.29■□□□□ 0.36
CDC42BPB-209ENST00000634889 SAMD1Q6SPF0 538 aaPredicted RBP17.29■□□□□ 0.36
CDC42BPB-209ENST00000634889 KCTD1Q719H9 257 aa17.29■□□□□ 0.36
CDC42BPB-209ENST00000634889 SHCBP1Q8NEM2 672 aa17.29■□□□□ 0.36
CDC42BPB-209ENST00000634889 KIFC2Q96AC6 838 aa17.29■□□□□ 0.36
CDC42BPB-209ENST00000634889 PORCNQ9H237 461 aa17.29■□□□□ 0.36
CDC42BPB-209ENST00000634889 ISY1Q9ULR0 285 aaKnown RBP17.29■□□□□ 0.36
CDC42BPB-209ENST00000634889 MTMR7Q9Y216 660 aa17.29■□□□□ 0.36
CDC42BPB-209ENST00000634889 ATP2A1O14983 1001 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 ECM2O94769 699 aaPredicted RBP17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 OAZ1P54368 228 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 ZNF543Q08ER8 600 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 IKQ13123 557 aaPredicted RBP17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 TMEM132BQ14DG7 1078 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 WTAPQ15007 396 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 BTNL9Q6UXG8 535 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 RASGRP2Q7LDG7 609 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 REPS2Q8NFH8 660 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 SOCS4Q8WXH5 440 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 TMEM87BQ96K49 555 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 MOV10L1Q9BXT6 1211 aaKnown RBP17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 SLC38A10Q9HBR0 1119 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 ZNF214Q9UL59 606 aaPredicted RBP17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 ZNF236Q9UL36 1845 aa17.28■□□□□ 0.36
CDC42BPB-209ENST00000634889 WDR19Q8NEZ3 1342 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 PLXNB2O15031 1838 aa17.27■□□□□ 0.36
CDC42BPB-209ENST00000634889 PRC1O43663 620 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms