RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 TPTE2Q6XPS3 522 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 DZIP1Q86YF9 867 aaKnown RBP9.16□□□□□ -0.94
GPC3-204ENST00000631057 GPIHBP1Q8IV16 184 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 TMEM139Q8IV31 216 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 REXO1L1PQ8IX06 675 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 TRMT44Q8IYL2 757 aaKnown RBP9.16□□□□□ -0.94
GPC3-204ENST00000631057 SRBD1Q8N5C6 995 aaKnown RBP9.16□□□□□ -0.94
GPC3-204ENST00000631057 IQUBQ8NA54 791 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 EPSTI1Q96J88 318 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 GJD4Q96KN9 370 aaPredicted RBP9.16□□□□□ -0.94
GPC3-204ENST00000631057 CTAGE1Q96RT6 745 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 SH3GLB2Q9NR46 395 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 PPP2R2CQ9Y2T4 447 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.16□□□□□ -0.94
GPC3-204ENST00000631057 AFF2P51816 1311 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 LY75O60449 1722 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 TNRC6CQ9HCJ0 1690 aaKnown RBP9.16□□□□□ -0.94
GPC3-204ENST00000631057 VWA3AA6NCI4 1184 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 TSPY2A6NKD2 308 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 AFMP43652 599 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 GNAQP50148 359 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 PTGDRQ13258 359 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 CUL4BQ13620 913 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 NR1I3Q14994 352 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 ELF2Q15723 593 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 FAM98CQ17RN3 349 aaKnown RBP9.16□□□□□ -0.94
GPC3-204ENST00000631057 FILIP1LQ4L180 1135 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 FAM47AQ5JRC9 791 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 TRIM65Q6PJ69 517 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 AMOTL1Q8IY63 956 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 TC2NQ8N9U0 490 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 WDR66Q8TBY9 1149 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 PANX2Q96RD6 677 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 KAT14Q9H8E8 782 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 TFCP2L1Q9NZI6 479 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 DNAI1Q9UI46 699 aa9.16□□□□□ -0.94
GPC3-204ENST00000631057 ROBO3Q96MS0 1386 aa9.15□□□□□ -0.94
GPC3-204ENST00000631057 NMT2O60551 498 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 CYP2D6P10635 497 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 PRDX5P30044 214 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 TXLNAP40222 546 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 GSTO1P78417 241 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 GOLGA8FQ08AF8 430 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 GOLGA8DPQ0D2H9 430 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 HSP90AA4PQ58FG1 418 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 CDKAL1Q5VV42 579 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 ARL6IP4Q66PJ3 421 aaKnown RBP9.15□□□□□ -0.95
GPC3-204ENST00000631057 PIK3AP1Q6ZUJ8 805 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 PPFIBP1Q86W92 1011 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 DGKHQ86XP1 1220 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 FAM177A1Q8N128 213 aaPredicted RBP9.15□□□□□ -0.95
GPC3-204ENST00000631057 ANKS1AQ92625 1134 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 NAA15Q9BXJ9 866 aaKnown RBP9.15□□□□□ -0.95
GPC3-204ENST00000631057 SAMSN1Q9NSI8 373 aaKnown RBP9.15□□□□□ -0.95
GPC3-204ENST00000631057 MCM9Q9NXL9 1143 aa9.15□□□□□ -0.95
GPC3-204ENST00000631057 SRP68Q9UHB9 627 aaKnown RBP9.15□□□□□ -0.95
GPC3-204ENST00000631057 DDX41Q9UJV9 622 aaKnown RBP9.15□□□□□ -0.95
GPC3-204ENST00000631057 AKR1B15C9JRZ8 316 aaPredicted RBP9.14□□□□□ -0.95
GPC3-204ENST00000631057 PITPNM1O00562 1244 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 WNT7AO00755 349 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 GNPATO15228 680 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 LDHBP07195 334 aaKnown RBP9.14□□□□□ -0.95
GPC3-204ENST00000631057 LONP1P36776 959 aaKnown RBP9.14□□□□□ -0.95
GPC3-204ENST00000631057 USP5P45974 858 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 GRM4Q14833 912 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 KMT5BQ4FZB7 885 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 UTP14CQ5TAP6 766 aaKnown RBP9.14□□□□□ -0.95
GPC3-204ENST00000631057 C12orf60Q5U649 245 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 GALNT17Q6IS24 598 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 RCSD1Q6JBY9 416 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 KLHL10Q6JEL2 608 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 CERS3Q8IU89 383 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 MNS1Q8NEH6 495 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 MED15Q96RN5 788 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 GTPBP4Q9BZE4 634 aaKnown RBP9.14□□□□□ -0.95
GPC3-204ENST00000631057 QTRT2Q9H974 415 aaKnown RBP9.14□□□□□ -0.95
GPC3-204ENST00000631057 RMND1Q9NWS8 449 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.14□□□□□ -0.953e-56■□□□□ 8.4
GPC3-204ENST00000631057 LEMD3Q9Y2U8 911 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 RTCBQ9Y3I0 505 aaKnown RBP9.14□□□□□ -0.95
GPC3-204ENST00000631057 V9GYY5 206 aaPredicted RBP9.14□□□□□ -0.95
GPC3-204ENST00000631057 FOCADQ5VW36 1801 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 IRS2Q9Y4H2 1338 aa9.14□□□□□ -0.95
GPC3-204ENST00000631057 A6NJR5 290 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 PPP1R3GB7ZBB8 358 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 NPHP1O15259 732 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 BAG3O95817 575 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 LDHCP07864 332 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 TPM1P09493 284 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 USP17L8P0C7I0 530 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 CD44P16070 742 aaKnown RBP9.13□□□□□ -0.95
GPC3-204ENST00000631057 ADKP55263 362 aaKnown RBP9.13□□□□□ -0.95
GPC3-204ENST00000631057 TFAP4Q01664 338 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 SPAG1Q07617 926 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 NOM1Q5C9Z4 860 aaKnown RBP9.13□□□□□ -0.95
GPC3-204ENST00000631057 PDXDC2PQ6P474 469 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 FBXO38Q6PIJ6 1188 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 APTXQ7Z2E3 356 aaKnown RBP9.13□□□□□ -0.95
GPC3-204ENST00000631057 BLIDQ8IZY5 108 aa9.13□□□□□ -0.95
GPC3-204ENST00000631057 PNMA1Q8ND90 353 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms