RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 BICD2Q8TD16 824 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 TMEM47Q9BQJ4 181 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 CFAP45Q9UL16 551 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 AP5Z1O43299 807 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 CACNA1SQ13698 1873 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 RGPD3A6NKT7 1758 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 RGPD4Q7Z3J3 1758 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 CCDC194A0A1B0GVG4 234 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 PTPDC1A2A3K4 754 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 SMIM22K7EJ46 135 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 MTMR2Q13614 643 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 NUP88Q99567 741 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 SCAND2PQ9GZW5 306 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 IVNS1ABPQ9Y6Y0 642 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 CTNND1O60716 968 aaKnown RBP14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 MYCNP04198 464 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 SCRN1Q12765 414 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 NSMFQ6X4W1 530 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 DGKHQ86XP1 1220 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 ENAHQ8N8S7 591 aaPredicted RBP14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 POTEJP0CG39 1038 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 APOA5Q6Q788 366 aa14.29□□□□□ -0.12
SYNGAP1-207ENST00000628646 DOCK2Q92608 1830 aa14.28□□□□□ -0.12
SYNGAP1-207ENST00000628646 CAP2P40123 477 aa14.28□□□□□ -0.12
SYNGAP1-207ENST00000628646 F5H6K3 240 aa14.28□□□□□ -0.12
SYNGAP1-207ENST00000628646 SH2B2O14492 632 aaPredicted RBP14.28□□□□□ -0.12
SYNGAP1-207ENST00000628646 KLRC3Q07444 240 aa14.28□□□□□ -0.12
SYNGAP1-207ENST00000628646 RESTQ13127 1097 aa14.28□□□□□ -0.12
SYNGAP1-207ENST00000628646 CDAN1Q8IWY9 1227 aa14.28□□□□□ -0.12
SYNGAP1-207ENST00000628646 SCYL3Q8IZE3 742 aa14.28□□□□□ -0.12
SYNGAP1-207ENST00000628646 ZNF280CQ8ND82 737 aa14.28□□□□□ -0.12
SYNGAP1-207ENST00000628646 ALAS1P13196 640 aa14.27□□□□□ -0.12
SYNGAP1-207ENST00000628646 PRELPP51888 382 aa14.27□□□□□ -0.12
SYNGAP1-207ENST00000628646 FAM83BQ5T0W9 1011 aa14.27□□□□□ -0.12
SYNGAP1-207ENST00000628646 CCDC73Q6ZRK6 1079 aa14.27□□□□□ -0.12
SYNGAP1-207ENST00000628646 FBXL16Q8N461 479 aa14.27□□□□□ -0.12
SYNGAP1-207ENST00000628646 GPATCH4Q5T3I0 446 aaKnown RBP14.27□□□□□ -0.12
SYNGAP1-207ENST00000628646 MB21D2Q8IYB1 491 aaPredicted RBP14.27□□□□□ -0.12
SYNGAP1-207ENST00000628646 CCDC148Q8NFR7 591 aa14.27□□□□□ -0.12
SYNGAP1-207ENST00000628646 MTMR4Q9NYA4 1195 aa14.27□□□□□ -0.12
SYNGAP1-207ENST00000628646 NRDCO43847 1150 aa14.27□□□□□ -0.13
SYNGAP1-207ENST00000628646 OSBPP22059 807 aa14.27□□□□□ -0.13
SYNGAP1-207ENST00000628646 FCHSD1Q86WN1 690 aa14.27□□□□□ -0.13
SYNGAP1-207ENST00000628646 MTMR14Q8NCE2 650 aa14.27□□□□□ -0.13
SYNGAP1-207ENST00000628646 CPVLQ9H3G5 476 aa14.27□□□□□ -0.13
SYNGAP1-207ENST00000628646 ZKSCAN5Q9Y2L8 839 aa14.27□□□□□ -0.13
SYNGAP1-207ENST00000628646 PFKFB2O60825 505 aa14.27□□□□□ -0.13
SYNGAP1-207ENST00000628646 HIRAP54198 1017 aaPredicted RBP14.27□□□□□ -0.13
SYNGAP1-207ENST00000628646 EVX2Q03828 476 aa14.27□□□□□ -0.13
SYNGAP1-207ENST00000628646 RBM43Q6ZSC3 357 aaKnown RBP14.27□□□□□ -0.13
SYNGAP1-207ENST00000628646 ECM29Q5VYK3 1845 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 DDAH1O94760 285 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 LIG1P18858 919 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 STAT2P52630 851 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 EVCP57679 992 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 UVSSAQ2YD98 709 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 EHD4Q9H223 541 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 CASZ1Q86V15 1759 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 COL4A1P02462 1669 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 OFD1O75665 1012 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 PDIA3P30101 505 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 NSUN7Q8NE18 718 aaKnown RBP14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 PGBD1Q96JS3 809 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 LZTS2Q9BRK4 669 aa14.26□□□□□ -0.13
SYNGAP1-207ENST00000628646 LIFRP42702 1097 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 SNAP25P60880 206 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 TPM4P67936 248 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 PPP2R5BQ15173 497 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 ASPRV1Q53RT3 343 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 NCAPG2Q86XI2 1143 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 ACER1Q8TDN7 264 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 ZNF274Q96GC6 653 aaPredicted RBP14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 C6orf50Q9HD87 102 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 CFBP00751 764 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 SHMT1P34896 483 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 STK38Q15208 465 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 CCDC43Q96MW1 224 aaKnown RBP14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 ANAPC4Q9UJX5 808 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 ERO1BQ86YB8 467 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 NKX2-3Q8TAU0 364 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 COL24A1Q17RW2 1714 aa14.25□□□□□ -0.13
SYNGAP1-207ENST00000628646 LAMB2P55268 1798 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 CCL15-CCL14A0A0B4J2E2 113 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 SPDYE3A6NKU9 549 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 SNAPC2Q13487 334 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 CCL15Q16663 113 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 ZSCAN16Q9H4T2 348 aaPredicted RBP14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 BIN2Q9UBW5 565 aaPredicted RBP14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 A0A1B0GUL6 1792 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 ECE1P42892 770 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 CHMP4BP1P59074 171 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 SASS6Q6UVJ0 657 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 LEO1Q8WVC0 666 aaPredicted RBP14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 SPATA32Q96LK8 384 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 EHMT1Q9H9B1 1298 aa14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
SYNGAP1-207ENST00000628646 CCPG1Q9ULG6 757 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms