RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 STX8Q9UNK0 236 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 TACC3Q9Y6A5 838 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 NEDD4P46934 1319 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 ADGRA2Q96PE1 1338 aa9.46□□□□□ -0.9
CHD2-213ENST00000628118 ERICH2A1L162 156 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 B4E1Z4 1266 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 E7EWF7 191 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 SLC27A2O14975 620 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 PLA2G6O60733 806 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 KDM4AO75164 1064 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 HMGB1P09429 215 aaKnown RBP9.45□□□□□ -0.9
CHD2-213ENST00000628118 FDX1P10109 184 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 BCRP11274 1271 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 MCCP23508 829 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 HERVK_113P62684 666 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 COG2Q14746 738 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 KIF22Q14807 665 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 ZYXQ15942 572 aaKnown RBP9.45□□□□□ -0.9
CHD2-213ENST00000628118 PKN2Q16513 984 aaKnown RBP9.45□□□□□ -0.9
CHD2-213ENST00000628118 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
CHD2-213ENST00000628118 ZNF296Q8WUU4 475 aaPredicted RBP9.45□□□□□ -0.9
CHD2-213ENST00000628118 KCNB2Q92953 911 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 GMCL1Q96IK5 515 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 ZSCAN10Q96SZ4 725 aaPredicted RBP9.45□□□□□ -0.9
CHD2-213ENST00000628118 RPAP3Q9H6T3 665 aaPredicted RBP9.45□□□□□ -0.9
CHD2-213ENST00000628118 RTN4Q9NQC3 1192 aaKnown RBP9.45□□□□□ -0.9
CHD2-213ENST00000628118 INCENPQ9NQS7 918 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 ZSWIM5Q9P217 1185 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 MORF4L1Q9UBU8 362 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 RABGAP1Q9Y3P9 1069 aa9.45□□□□□ -0.9
CHD2-213ENST00000628118 NDUFB10O96000 172 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 CYP2C8P10632 490 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 HOXD10P28358 340 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 MCM5P33992 734 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 HSPA4P34932 840 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 PRMT2P55345 433 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 CCNA1P78396 465 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 SLFN13Q68D06 897 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 FAM160B2Q86V87 743 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 CLEC10AQ8IUN9 316 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 TMTC2Q8N394 836 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 DCAF4Q8WV16 495 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 TMEM87BQ96K49 555 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 TANGO6Q9C0B7 1094 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 FEM1BQ9UK73 627 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 PCDHB8Q9UN66 801 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 WDR19Q8NEZ3 1342 aa9.44□□□□□ -0.9
CHD2-213ENST00000628118 CASP8AP2Q9UKL3 1982 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 TNKSO95271 1327 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 FLOT1O75955 427 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 BMP3P12645 472 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 PSMA5P28066 241 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 COPB2P35606 906 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 SLC1A4P43007 532 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 LACTBP83111 547 aaPredicted RBP9.43□□□□□ -0.9
CHD2-213ENST00000628118 DGKZQ13574 1117 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 GPATCH4Q5T3I0 446 aaKnown RBP9.43□□□□□ -0.9
CHD2-213ENST00000628118 IFIT1BQ5T764 474 aaKnown RBP9.43□□□□□ -0.9
CHD2-213ENST00000628118 MB21D2Q8IYB1 491 aaPredicted RBP9.43□□□□□ -0.9
CHD2-213ENST00000628118 SPICE1Q8N0Z3 855 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 LRRC47Q8N1G4 583 aaKnown RBP9.43□□□□□ -0.9
CHD2-213ENST00000628118 PRPF38AQ8NAV1 312 aaKnown RBP9.43□□□□□ -0.9
CHD2-213ENST00000628118 GPRC5AQ8NFJ5 357 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 CHURC1Q8WUH1 139 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 RNF25Q96BH1 459 aaPredicted RBP9.43□□□□□ -0.9
CHD2-213ENST00000628118 NEK1Q96PY6 1258 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 P2RX7Q99572 595 aaKnown RBP9.43□□□□□ -0.9
CHD2-213ENST00000628118 TMEM47Q9BQJ4 181 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 USP26Q9BXU7 913 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 R3HDMLQ9H3Y0 253 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 KAT14Q9H8E8 782 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 CPA4Q9UI42 421 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 PNMA2Q9UL42 364 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 PPP1R9AQ9ULJ8 1098 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 ADAMTS5Q9UNA0 930 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 GTF3C3Q9Y5Q9 886 aa9.43□□□□□ -0.9
CHD2-213ENST00000628118 PCNTO95613 3336 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 SPDYE16A6NNV3 312 aaPredicted RBP9.42□□□□□ -0.9
CHD2-213ENST00000628118 IFIT3O14879 490 aaKnown RBP9.42□□□□□ -0.9
CHD2-213ENST00000628118 RAD21O60216 631 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 NMT2O60551 498 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 SNHG28P0DPA3 235 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 STAT2P52630 851 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 OAZ1P54368 228 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 FCGRTP55899 365 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 ERVK-9P63128 1117 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 ERVK-24P63145 666 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 WTAPQ15007 396 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 SEC23AQ15436 765 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 KIAA1755Q5JYT7 1200 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 FAM83BQ5T0W9 1011 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 STOX1Q6ZVD7 989 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 CYB5R4Q7L1T6 521 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 CTU1Q7Z7A3 348 aaKnown RBP9.42□□□□□ -0.9
CHD2-213ENST00000628118 ANKRD13CQ8N6S4 541 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 ENAHQ8N8S7 591 aaPredicted RBP9.42□□□□□ -0.9
CHD2-213ENST00000628118 PNMA1Q8ND90 353 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 SLF1Q9BQI6 1058 aa9.42□□□□□ -0.9
CHD2-213ENST00000628118 ATP2A1O14983 1001 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms