RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 ST3GAL1Q11201 340 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 SREBF2Q12772 1141 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 PKP1Q13835 747 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 SEC23AQ15436 765 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 SLC4A8Q2Y0W8 1093 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 FAM47AQ5JRC9 791 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 APOBEC3HQ6NTF7 200 aaKnown RBP11.74□□□□□ -0.53
LINC01943-202ENST00000628090 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 ANKS1AQ92625 1134 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 DYNLL2Q96FJ2 89 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 PTPN18Q99952 460 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 ELP3Q9H9T3 547 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 BRMS1Q9HCU9 246 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
LINC01943-202ENST00000628090 HPS5Q9UPZ3 1129 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 ZDHHC9Q9Y397 364 aa11.74□□□□□ -0.53
LINC01943-202ENST00000628090 DDX49Q9Y6V7 483 aaKnown RBP11.74□□□□□ -0.53
LINC01943-202ENST00000628090 IREB2P48200 963 aaKnown RBP11.73□□□□□ -0.53
LINC01943-202ENST00000628090 PLCD1P51178 756 aa11.73□□□□□ -0.53
LINC01943-202ENST00000628090 COL9A3Q14050 684 aaPredicted RBP11.73□□□□□ -0.53
LINC01943-202ENST00000628090 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.73□□□□□ -0.53
LINC01943-202ENST00000628090 BRAPQ7Z569 592 aa11.73□□□□□ -0.53
LINC01943-202ENST00000628090 CCDC144CPQ8IYA2 1237 aa11.73□□□□□ -0.53
LINC01943-202ENST00000628090 NEDD1Q8NHV4 660 aa11.73□□□□□ -0.53
LINC01943-202ENST00000628090 ALG1Q9BT22 464 aa11.73□□□□□ -0.53
LINC01943-202ENST00000628090 SLC26A6Q9BXS9 759 aa11.73□□□□□ -0.53
LINC01943-202ENST00000628090 STX8Q9UNK0 236 aa11.73□□□□□ -0.53
LINC01943-202ENST00000628090 COL2A1P02458 1487 aaPredicted RBP11.72□□□□□ -0.53
LINC01943-202ENST00000628090 MANSC4A6NHS7 340 aaPredicted RBP11.72□□□□□ -0.53
LINC01943-202ENST00000628090 PRPF40AO75400 957 aaKnown RBP11.72□□□□□ -0.53
LINC01943-202ENST00000628090 WDHD1O75717 1129 aaPredicted RBP11.72□□□□□ -0.53
LINC01943-202ENST00000628090 CTDNEP1O95476 244 aa11.72□□□□□ -0.53
LINC01943-202ENST00000628090 ZBTB48P10074 688 aaPredicted RBP11.72□□□□□ -0.53
LINC01943-202ENST00000628090 TOP1P11387 765 aaKnown RBP11.72□□□□□ -0.53
LINC01943-202ENST00000628090 RASA1P20936 1047 aa11.72□□□□□ -0.53
LINC01943-202ENST00000628090 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC01943-202ENST00000628090 TNFAIP1Q13829 316 aa11.72□□□□□ -0.53
LINC01943-202ENST00000628090 IFNLR1Q8IU57 520 aaPredicted RBP11.72□□□□□ -0.53
LINC01943-202ENST00000628090 PNMA1Q8ND90 353 aa11.72□□□□□ -0.53
LINC01943-202ENST00000628090 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
LINC01943-202ENST00000628090 CFHR5Q9BXR6 569 aa11.72□□□□□ -0.53
LINC01943-202ENST00000628090 RNF26Q9BY78 433 aaPredicted RBP11.72□□□□□ -0.53
LINC01943-202ENST00000628090 CABP5Q9NP86 173 aa11.72□□□□□ -0.53
LINC01943-202ENST00000628090 MKI67P46013 3256 aaKnown RBP11.72□□□□□ -0.53
LINC01943-202ENST00000628090 MYH15Q9Y2K3 1946 aa11.72□□□□□ -0.53
LINC01943-202ENST00000628090 MPHOSPH10O00566 681 aaKnown RBP11.71□□□□□ -0.53
LINC01943-202ENST00000628090 FKTNO75072 461 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 RXRAP19793 462 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 ADD1P35611 737 aaKnown RBP11.71□□□□□ -0.53
LINC01943-202ENST00000628090 INHBEP58166 350 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 CAP1Q01518 475 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 TCP10Q12799 353 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 KLHL40Q2TBA0 621 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 FKBP1CQ5VVH2 108 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 RAB11FIP4Q86YS3 637 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 ANKRD13AQ8IZ07 590 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 OPTNQ96CV9 577 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 HOOK2Q96ED9 719 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 MS4A4AQ96JQ5 239 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 HERC5Q9UII4 1024 aaKnown RBP11.71□□□□□ -0.53
LINC01943-202ENST00000628090 TACC3Q9Y6A5 838 aa11.71□□□□□ -0.53
LINC01943-202ENST00000628090 BRCA2P51587 3418 aa11.7□□□□□ -0.54
LINC01943-202ENST00000628090 PLIN4Q96Q06 1357 aa11.7□□□□□ -0.54
LINC01943-202ENST00000628090 UNCXA6NJT0 531 aa11.7□□□□□ -0.54
LINC01943-202ENST00000628090 PRPF3O43395 683 aaKnown RBP11.7□□□□□ -0.54
LINC01943-202ENST00000628090 TTLL1O95922 423 aa11.7□□□□□ -0.54
LINC01943-202ENST00000628090 PARP1P09874 1014 aaKnown RBP11.7□□□□□ -0.54
LINC01943-202ENST00000628090 CDC27P30260 824 aa11.7□□□□□ -0.54
LINC01943-202ENST00000628090 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
LINC01943-202ENST00000628090 VGLL4Q14135 290 aa11.7□□□□□ -0.54
LINC01943-202ENST00000628090 FOXD4L6Q3SYB3 417 aaPredicted RBP11.7□□□□□ -0.54
LINC01943-202ENST00000628090 CERKLQ49MI3 558 aaPredicted RBP11.7□□□□□ -0.54
LINC01943-202ENST00000628090 NOM1Q5C9Z4 860 aaKnown RBP11.7□□□□□ -0.54
LINC01943-202ENST00000628090 FOXD4L3Q6VB84 417 aaPredicted RBP11.7□□□□□ -0.54
LINC01943-202ENST00000628090 FERMT3Q86UX7 667 aa11.7□□□□□ -0.54
LINC01943-202ENST00000628090 FAM177A1Q8N128 213 aaPredicted RBP11.7□□□□□ -0.54
LINC01943-202ENST00000628090 TMEM87AQ8NBN3 555 aa11.7□□□□□ -0.54
LINC01943-202ENST00000628090 FBXO18Q8NFZ0 1043 aa11.7□□□□□ -0.54
LINC01943-202ENST00000628090 ZKSCAN4Q969J2 545 aaPredicted RBP11.7□□□□□ -0.54
LINC01943-202ENST00000628090 TCHHQ07283 1943 aa11.7□□□□□ -0.54
LINC01943-202ENST00000628090 CEP290O15078 2479 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 OTOFQ9HC10 1997 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 TESPA1A2RU30 521 aaPredicted RBP11.69□□□□□ -0.54
LINC01943-202ENST00000628090 FIBPO43427 364 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 ALDH1A1P00352 501 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 FOSBP53539 338 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 UBE2HP62256 183 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 GABPAQ06546 454 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 CRHR2Q13324 411 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 FAM83AQ86UY5 434 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 ZFPM1Q8IX07 1006 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC01943-202ENST00000628090 CCDC12Q8WUD4 166 aaPredicted RBP11.69□□□□□ -0.54
LINC01943-202ENST00000628090 FAM151AQ8WW52 585 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 BRI3BPQ8WY22 251 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 SPATA32Q96LK8 384 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 SENP2Q9HC62 589 aa11.69□□□□□ -0.54
LINC01943-202ENST00000628090 DDX4Q9NQI0 724 aaKnown RBP11.69□□□□□ -0.54
LINC01943-202ENST00000628090 KIAA0100Q14667 2235 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms