RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 PDE4BQ07343 736 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 SPP2Q13103 211 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 TAF1CQ15572 869 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 ZYXQ15942 572 aaKnown RBP8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 C12orf60Q5U649 245 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 CTR9Q6PD62 1173 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 FASTKD5Q7L8L6 764 aaKnown RBP8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 IFNL3Q8IZI9 196 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 RDH13Q8NBN7 331 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 ZNF280CQ8ND82 737 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 PHOX2BQ99453 314 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 DNAJC18Q9H819 358 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 EPB41L4AQ9HCS5 686 aaPredicted RBP8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 GINM1Q9NU53 330 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 RNF186Q9NXI6 227 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 SAGE1Q9NXZ1 904 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 TMOD4Q9NZQ9 345 aa8.59□□□□□ -1.03
NPLOC4-221ENST00000625705 DDX11L8A8MPP1 907 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 CXCL11O14625 94 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 RAD21O60216 631 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 TBC1D8O95759 1140 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 SHMT1P34896 483 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 SLC19A1P41440 591 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 TM4SF4P48230 202 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 CDK8P49336 464 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 LBX1P52954 281 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 PPARAQ07869 468 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 MTMR2Q13614 643 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 SBK1Q52WX2 424 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 KIAA1211Q6ZU35 1233 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 TMEM179Q6ZVK1 233 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 C16orf86Q6ZW13 317 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 SKAP1Q86WV1 359 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 SCUBE3Q8IX30 993 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 ZNF444Q8N0Y2 327 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 BRI3BPQ8WY22 251 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 EMID1Q96A84 441 aaPredicted RBP8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 CCDC17Q96LX7 622 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 ARHGEF10LQ9HCE6 1279 aa8.58□□□□□ -1.04
NPLOC4-221ENST00000625705 RAD50Q92878 1312 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 IGF2BP3O00425 579 aaKnown RBP eCLIP8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 ADH1BP00325 375 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 HSPA8P11142 646 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 HMGCS2P54868 508 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 ICA1Q05084 483 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 PABPC4Q13310 644 aaKnown RBP eCLIP8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 SEPT2Q15019 361 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 RRP12Q5JTH9 1297 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 VPS53Q5VIR6 699 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 TATDN1Q6P1N9 297 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 TRAF7Q6Q0C0 670 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 ZNF589Q86UQ0 364 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 METTL16Q86W50 562 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 SMCR8Q8TEV9 937 aaPredicted RBP8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 PARK7Q99497 189 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 SH2D4AQ9H788 454 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 ZFYVE28Q9HCC9 887 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 ISY1Q9ULR0 285 aaKnown RBP8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 KCNH4Q9UQ05 1017 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 AFG3L2Q9Y4W6 797 aa8.57□□□□□ -1.04
NPLOC4-221ENST00000625705 A0A0G2JLL6 359 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 TSPY2A6NKD2 308 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 C19orf81C9J6K1 198 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 BTBD19C9JJ37 291 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 USP17L10C9JJH3 530 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 PDHXO00330 501 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 ZNF213O14771 459 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 PRDM1O75626 825 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 TSPY3P0CV98 308 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 TSPY8P0CW00 308 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 HSPD1P10809 573 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 AKR1B1P15121 316 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 CHMLP26374 656 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 HAND2P61296 217 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 IRX3P78415 501 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 CTDSPL2Q05D32 466 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 GABPAQ06546 454 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 RRP1BQ14684 758 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 IMMTQ16891 758 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 SHROOM1Q2M3G4 852 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 BMP2KLQ5H9B9 411 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 PRRT2Q7Z6L0 340 aaPredicted RBP8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 ANKRD23Q86SG2 305 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 FAM43AQ8N2R8 423 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 CTNNA3Q9UI47 895 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 ROBO3Q96MS0 1386 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 PHIPQ8WWQ0 1821 aa8.56□□□□□ -1.04
NPLOC4-221ENST00000625705 PTPRFP10586 1907 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 SMIM22K7EJ46 135 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 RANBP6O60518 1105 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 CDC45O75419 566 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 FGAP02671 866 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 USP14P54578 494 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 BACE1P56817 501 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 CRHR2Q13324 411 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 KIF22Q14807 665 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 USP17L2Q6R6M4 530 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 CLEC10AQ8IUN9 316 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 ANKLE1Q8NAG6 615 aa8.55□□□□□ -1.04
NPLOC4-221ENST00000625705 PROCA1Q8NCQ7 364 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms