RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 VCAM1P19320 739 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 SPICE1Q8N0Z3 855 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 NEDD1Q8NHV4 660 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 ZNF296Q8WUU4 475 aaPredicted RBP11.29□□□□□ -0.6
LINC01560-202ENST00000624822 ESR2Q92731 530 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 CFHR5Q9BXR6 569 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 NBPF3Q9H094 633 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 PRDM10Q9NQV6 1147 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 CLIP2Q9UDT6 1046 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 CPA4Q9UI42 421 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 STX8Q9UNK0 236 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 SLC45A1Q9Y2W3 748 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 RBM8AQ9Y5S9 174 aaKnown RBP11.29□□□□□ -0.6
LINC01560-202ENST00000624822 TACC3Q9Y6A5 838 aa11.29□□□□□ -0.6
LINC01560-202ENST00000624822 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 B4E1Z4 1266 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 TTLL1O95922 423 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 TRDNQ13061 729 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 MAP4K1Q92918 833 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 C12orf42Q96LP6 360 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC01560-202ENST00000624822 KRT23Q9C075 422 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 TANGO6Q9C0B7 1094 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 LSG1Q9H089 658 aaKnown RBP11.28□□□□□ -0.6
LINC01560-202ENST00000624822 ASCC2Q9H1I8 757 aaPredicted RBP11.28□□□□□ -0.6
LINC01560-202ENST00000624822 RPAP3Q9H6T3 665 aaPredicted RBP11.28□□□□□ -0.6
LINC01560-202ENST00000624822 VCPKMTQ9H867 229 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 CNNM2Q9H8M5 875 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 MTMR4Q9NYA4 1195 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 NYAP2Q9P242 653 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 ISY1Q9ULR0 285 aaKnown RBP11.28□□□□□ -0.6
LINC01560-202ENST00000624822 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
LINC01560-202ENST00000624822 RLFQ13129 1914 aa11.27□□□□□ -0.6
LINC01560-202ENST00000624822 IGKV6D-41A0A0C4DH26 115 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 USP17L15C9J2P7 530 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 USP17L13C9JLJ4 530 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 USP17L11C9JVI0 530 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 USP17L18D6R9N7 530 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 USP17L22D6RA61 530 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 USP17L17D6RBQ6 530 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 USP17L19D6RCP7 530 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 USP17L20D6RJB6 530 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 NMT2O60551 498 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 KDM4AO75164 1064 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 CYP21A2P08686 494 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 FGRP09769 529 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 SP3Q02447 781 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 USP17L24Q0WX57 530 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 KIF22Q14807 665 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 RALYLQ86SE5 291 aaKnown RBP11.27□□□□□ -0.61
LINC01560-202ENST00000624822 IQCA1Q86XH1 822 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 LRRC47Q8N1G4 583 aaKnown RBP11.27□□□□□ -0.61
LINC01560-202ENST00000624822 LPAR1Q92633 364 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 ZKSCAN3Q9BRR0 538 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 MTMR7Q9Y216 660 aa11.27□□□□□ -0.61
LINC01560-202ENST00000624822 WDR46O15213 610 aaKnown RBP11.26□□□□□ -0.61
LINC01560-202ENST00000624822 NUDT7P0C024 238 aa11.26□□□□□ -0.61
LINC01560-202ENST00000624822 HOXA7P31268 230 aaPredicted RBP11.26□□□□□ -0.61
LINC01560-202ENST00000624822 SIAH1Q8IUQ4 282 aa11.26□□□□□ -0.61
LINC01560-202ENST00000624822 ANKRD13CQ8N6S4 541 aa11.26□□□□□ -0.61
LINC01560-202ENST00000624822 CD99L2Q8TCZ2 262 aa11.26□□□□□ -0.61
LINC01560-202ENST00000624822 RNF166Q96A37 237 aaPredicted RBP11.26□□□□□ -0.61
LINC01560-202ENST00000624822 CHMP4CQ96CF2 233 aa11.26□□□□□ -0.61
LINC01560-202ENST00000624822 ERO1AQ96HE7 468 aa11.26□□□□□ -0.61
LINC01560-202ENST00000624822 PAGR1Q9BTK6 254 aa11.26□□□□□ -0.61
LINC01560-202ENST00000624822 IL17RBQ9NRM6 502 aa11.26□□□□□ -0.61
LINC01560-202ENST00000624822 MYH6P13533 1939 aa11.26□□□□□ -0.61
LINC01560-202ENST00000624822 A0A0G2JMZ2 1700 aa11.26□□□□□ -0.61
LINC01560-202ENST00000624822 PLXNB2O15031 1838 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 E7EWF7 191 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 F5H6K3 240 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 FLOT1O75955 427 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 GCLCP48506 637 aaPredicted RBP11.25□□□□□ -0.61
LINC01560-202ENST00000624822 HERVK_113P62684 666 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 KLRC3Q07444 240 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 NOM1Q5C9Z4 860 aaKnown RBP11.25□□□□□ -0.61
LINC01560-202ENST00000624822 KIAA1755Q5JYT7 1200 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 FAM83BQ5T0W9 1011 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 COL13A1Q5TAT6 717 aaPredicted RBP11.25□□□□□ -0.61
LINC01560-202ENST00000624822 RNF20Q5VTR2 975 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 C17orf99Q6UX52 265 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 CATSPERGQ6ZRH7 1159 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 NCOA7Q8NI08 942 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 P2RX7Q99572 595 aaKnown RBP11.25□□□□□ -0.61
LINC01560-202ENST00000624822 UBAC1Q9BSL1 405 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 GTF3C3Q9Y5Q9 886 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 ADGRA2Q96PE1 1338 aa11.25□□□□□ -0.61
LINC01560-202ENST00000624822 SLC27A2O14975 620 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 REC8O95072 547 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 NT5C2P49902 561 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 IKQ13123 557 aaPredicted RBP11.24□□□□□ -0.61
LINC01560-202ENST00000624822 ARHGEF6Q15052 776 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 FAM110CQ1W6H9 321 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 CCDC178Q5BJE1 867 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 CREB3L3Q68CJ9 461 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 SLFN13Q68D06 897 aa11.24□□□□□ -0.61
LINC01560-202ENST00000624822 CCAR1Q8IX12 1150 aaKnown RBP11.24□□□□□ -0.61
LINC01560-202ENST00000624822 GTF3C2Q8WUA4 911 aaPredicted RBP11.24□□□□□ -0.61
LINC01560-202ENST00000624822 MKL1Q969V6 931 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms