RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 RNF141Q8WVD5 230 aa6.44□□□□□ -1.38
CDKL5-207ENST00000624700 MKL1Q969V6 931 aa6.44□□□□□ -1.38
CDKL5-207ENST00000624700 SUCOQ9UBS9 1254 aaKnown RBP6.44□□□□□ -1.38
CDKL5-207ENST00000624700 PLAGL2Q9UPG8 496 aa6.44□□□□□ -1.38
CDKL5-207ENST00000624700 KLF4O43474 513 aa6.43□□□□□ -1.38
CDKL5-207ENST00000624700 EOMESO95936 686 aa6.43□□□□□ -1.38
CDKL5-207ENST00000624700 ACRP10323 421 aa6.43□□□□□ -1.38
CDKL5-207ENST00000624700 NAT2P11245 290 aa6.43□□□□□ -1.38
CDKL5-207ENST00000624700 PMS1P54277 932 aaKnown RBP6.43□□□□□ -1.38
CDKL5-207ENST00000624700 SLC7A5Q01650 507 aa6.43□□□□□ -1.38
CDKL5-207ENST00000624700 ANKRD39Q53RE8 183 aa6.43□□□□□ -1.38
CDKL5-207ENST00000624700 SLC23A3Q6PIS1 610 aa6.43□□□□□ -1.38
CDKL5-207ENST00000624700 RUFY4Q6ZNE9 571 aa6.43□□□□□ -1.38
CDKL5-207ENST00000624700 KSR1Q8IVT5 923 aa6.43□□□□□ -1.38
CDKL5-207ENST00000624700 FAM169BQ8N8A8 192 aa6.43□□□□□ -1.38
CDKL5-207ENST00000624700 PIWIL2Q8TC59 973 aaKnown RBP6.43□□□□□ -1.38
CDKL5-207ENST00000624700 ZNF214Q9UL59 606 aaPredicted RBP6.43□□□□□ -1.38
CDKL5-207ENST00000624700 SNX11Q9Y5W9 270 aa6.43□□□□□ -1.38
CDKL5-207ENST00000624700 GNAT3A8MTJ3 354 aa6.42□□□□□ -1.38
CDKL5-207ENST00000624700 UBOX5O94941 541 aa6.42□□□□□ -1.38
CDKL5-207ENST00000624700 ZNF143P52747 638 aaPredicted RBP6.42□□□□□ -1.38
CDKL5-207ENST00000624700 FAM214BQ7L5A3 538 aa6.42□□□□□ -1.38
CDKL5-207ENST00000624700 RIN3Q8TB24 985 aa6.42□□□□□ -1.38
CDKL5-207ENST00000624700 KREMEN1Q96MU8 473 aa6.42□□□□□ -1.38
CDKL5-207ENST00000624700 TNKS2Q9H2K2 1166 aa6.42□□□□□ -1.38
CDKL5-207ENST00000624700 ITIH2P19823 946 aa6.41□□□□□ -1.38
CDKL5-207ENST00000624700 TCEAL1Q15170 157 aa6.41□□□□□ -1.38
CDKL5-207ENST00000624700 NFE2L2Q16236 605 aa6.41□□□□□ -1.38
CDKL5-207ENST00000624700 GNPTABQ3T906 1256 aa6.41□□□□□ -1.38
CDKL5-207ENST00000624700 NBPF12Q5TAG4 269 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-207ENST00000624700 FLAD1Q8NFF5 587 aa6.41□□□□□ -1.38
CDKL5-207ENST00000624700 HEXIM2Q96MH2 286 aaKnown RBP6.41□□□□□ -1.38
CDKL5-207ENST00000624700 SLC6A18Q96N87 628 aa6.41□□□□□ -1.38
CDKL5-207ENST00000624700 ASCC2Q9H1I8 757 aaPredicted RBP6.41□□□□□ -1.38
CDKL5-207ENST00000624700 ZNF865P0CJ78 1059 aaPredicted RBP6.4□□□□□ -1.38
CDKL5-207ENST00000624700 POLR2BP30876 1174 aaKnown RBP6.4□□□□□ -1.38
CDKL5-207ENST00000624700 LARP1BQ659C4 914 aaKnown RBP6.4□□□□□ -1.38
CDKL5-207ENST00000624700 VHLLQ6RSH7 139 aa6.4□□□□□ -1.38
CDKL5-207ENST00000624700 TMEM192Q8IY95 271 aa6.4□□□□□ -1.38
CDKL5-207ENST00000624700 ENOX1Q8TC92 643 aaKnown RBP6.4□□□□□ -1.38
CDKL5-207ENST00000624700 ASB11Q8WXH4 323 aa6.4□□□□□ -1.38
CDKL5-207ENST00000624700 VWCEQ96DN2 955 aa6.4□□□□□ -1.38
CDKL5-207ENST00000624700 DNAJC2Q99543 621 aaKnown RBP6.4□□□□□ -1.38
CDKL5-207ENST00000624700 SLC38A3Q99624 504 aa6.4□□□□□ -1.38
CDKL5-207ENST00000624700 CCDC113Q9H0I3 377 aa6.4□□□□□ -1.38
CDKL5-207ENST00000624700 EPN3Q9H201 632 aa6.4□□□□□ -1.38
CDKL5-207ENST00000624700 PRR13Q9NZ81 148 aa6.4□□□□□ -1.38
CDKL5-207ENST00000624700 LTBP3Q9NS15 1303 aa6.4□□□□□ -1.39
CDKL5-207ENST00000624700 FAM155AB1AL88 458 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-207ENST00000624700 DDAH1O94760 285 aa6.39□□□□□ -1.39
CDKL5-207ENST00000624700 DDR2Q16832 855 aa6.39□□□□□ -1.39
CDKL5-207ENST00000624700 FBLN7Q53RD9 439 aa6.39□□□□□ -1.39
CDKL5-207ENST00000624700 FAM178BQ8IXR5 827 aa6.39□□□□□ -1.39
CDKL5-207ENST00000624700 CCDC144CPQ8IYA2 1237 aa6.39□□□□□ -1.39
CDKL5-207ENST00000624700 HNRNPLLQ8WVV9 542 aaKnown RBP6.39□□□□□ -1.39
CDKL5-207ENST00000624700 ZNF669Q96BR6 464 aaPredicted RBP6.39□□□□□ -1.39
CDKL5-207ENST00000624700 MKRN2Q9H000 416 aaKnown RBP6.39□□□□□ -1.39
CDKL5-207ENST00000624700 A0A087WZG4 1122 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 MESP2Q0VG99 397 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 IKZF1Q13422 519 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 AUHQ13825 339 aaKnown RBP6.38□□□□□ -1.39
CDKL5-207ENST00000624700 ZYXQ15942 572 aaKnown RBP6.38□□□□□ -1.39
CDKL5-207ENST00000624700 KIAA1211LQ6NV74 962 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 ZSWIM9Q86XI8 627 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 C7orf61Q8IZ16 206 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 MFSD4AQ8N468 514 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 PMFBP1Q8TBY8 1022 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 FAM84AQ96KN4 292 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 APBA2Q99767 749 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 OSBPL2Q9H1P3 480 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 TRIT1Q9H3H1 467 aaKnown RBP6.38□□□□□ -1.39
CDKL5-207ENST00000624700 FAM53CQ9NYF3 392 aa6.38□□□□□ -1.39
CDKL5-207ENST00000624700 ANKRD34BA5PLL1 514 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 LRRC10BA6NIK2 292 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 CBX7O95931 251 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 CLCN7P51798 805 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 ZP2Q05996 745 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 SERINC3Q13530 473 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 NBPF9Q3BBW0 867 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 HEATR6Q6AI08 1181 aaKnown RBP6.37□□□□□ -1.39
CDKL5-207ENST00000624700 SPOCD1Q6ZMY3 1216 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 DPH6Q7L8W6 267 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 EEPD1Q7L9B9 569 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 BHLHE22Q8NFJ8 381 aaPredicted RBP6.37□□□□□ -1.39
CDKL5-207ENST00000624700 GBP3Q9H0R5 595 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 PRDM7Q9NQW5 492 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 FBXL21Q9UKT6 434 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 PCDHB12Q9Y5F1 795 aa6.37□□□□□ -1.39
CDKL5-207ENST00000624700 KCNMB1Q16558 191 aa6.36□□□□□ -1.39
CDKL5-207ENST00000624700 NOL9Q5SY16 702 aaKnown RBP6.36□□□□□ -1.39
CDKL5-207ENST00000624700 THAP5Q7Z6K1 395 aa6.36□□□□□ -1.39
CDKL5-207ENST00000624700 NOP9Q86U38 636 aaKnown RBP6.36□□□□□ -1.39
CDKL5-207ENST00000624700 SPACA3Q8IXA5 215 aa6.36□□□□□ -1.39
CDKL5-207ENST00000624700 DTWD2Q8NBA8 298 aa6.36□□□□□ -1.39
CDKL5-207ENST00000624700 ST13P5Q8NFI4 369 aaPredicted RBP6.36□□□□□ -1.39
CDKL5-207ENST00000624700 GPR62Q9BZJ7 368 aa6.36□□□□□ -1.39
CDKL5-207ENST00000624700 LNPKQ9C0E8 428 aa6.36□□□□□ -1.39
CDKL5-207ENST00000624700 GPATCH2Q9NW75 528 aa6.36□□□□□ -1.39
CDKL5-207ENST00000624700 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms